Job Description P30131 Confidence 91.99% Date Thu Jan 5 11:45:52 GMT 2012 Rank 50 Aligned Residues 270 % Identity 12% Template c3eo3B_ PDB info PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein Resolution 2.84 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		391	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure									.												.																	.
Query SS confidence									.												.																	.
Query Sequence		V	P	P	V	L	C	L	.	G	A	D	L	K	N	T	F	C	L	V	.	R	G	E	Q	A	V	L	S	Q	H	L	G	D	L	S	D	.	D	G	I	Q	M	Q	W	R	E	A	L	R	L	M	Q	N	I	Y	D	F	T	P	Q	Y	V	V	H	D	A	H	P	G	Y	V	S	S	Q	W	A	R	E	M	N
Query Conservation									.												.																	.
Alig confidence									.												.																	.
Template Conservation
Template Sequence		T	L	S	A	L	A	V	D	L	G	G	T	N	L	R	V	A	I	V	S	M	K	G	E	I	V	K	K	Y	T	Q	F	N	P	K	T	Y	E	E	R	I	N	L	I	L	Q	M	C	V	E	A	A	A	E	A	V	K	L	N	C	R	I	L	G	V	G	I	S	T	D	L	R	T	P	L	S	D	T	L	H
Template Known Secondary structure												S	S	S								T	T													S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	T	Q	T	V	L	H	H	H	A	H	A	A	A	C	L	A	E	H	Q	W	P	L	D	G	G	D	V	I	A	L	T	L	D	G	I	G	M	G	E	N	G	A	L	W	G	G	E	C	L	R	V	N	Y	R	E	C	E	H	L	G	G	L	P	A	V	A	L	P	G	G	D	L	A	A	K	Q	P	W
Query Conservation
Alig confidence																										.										.							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.										.							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	V	W	V	D	N	D	G	N	C	A	A	L	A	E	R	K	F	G	Q	G	K	G	.	L	E	N	F	V	T	L	I	T	.	G	T	G	I	G	G	.	G	I	I	H	Q	H	E	L	I	H	G	S	S	F	C	A	A	E	L	G	H	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																		T	S	T	T	T	T	.		S	S							.	S	S	S				.					T	T						T	T	S					G	G	G		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.										.							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.		.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	N	L	L	A	Q	C	L	R	F	V	P	E	W	Q	N	Y	S	E	T	A	S	V	Q	Q	Q	N	W	S	V	L	A	R	A	I	E	R	G	I	N	A	P	L	A	S	S	C	G	R	F	F	D	A	V	A	A	A	L	G	C	A	P	A	T	L	S	Y	E	G	E	A	A	C	A	L	E	A	L	A	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	L	D	G	P	D	C	S	C	G	S	H	G	C	I	E	A	Y	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			B		T	T	S		B	S	B						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																													572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
								627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	S	C	H	G	V	T	H	P	V	T	M	P	R	V	D	N	Q	L	D	L	A	T	F	W	Q	Q	W	L	N	W	Q	A	P	V	N	Q	R	A	W	A	F	H	D	A	L	A	Q	G	F	A	A	L	M	R	E	Q	A	T	M	R	G	I	T	T	L	V	F	S	G	G	V	I	H
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		G	M	A	L	Q	R	E	A	K	K	L	H	D	E	D	L	L	L	V	E	G	M	S	A	V	G	A	L	H	L	I	Q	A	A	K	L	G	.	.	.	.	N	A	K	A	Q	S	I	L	R	T	A	G	T	A	L	G	L	G	V	V	N	I	L	H	T	M	N	P	S	L	V	I	L	S	G	V	L	A	S
Template Known Secondary structure															T	T		S			S	S															T	T	.	.	.	.																													S						S	T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.					630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
		701			.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		N	.	.	R	L	L	R	A	R	L	A	H	Y	L	A	D	F	T	L	L	F	P	Q	S	L	P	A	G	D	G	G	L	S	L	G	Q	G	V	I	A	A	A	R
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		H	Y	I	H	I	V	K	D	V	I	R	Q	Q	A	L	S	S	V	Q	D	V	D	V	V	V	S	D	L	V	D	P	A	L	L	G	A	A	S	M	V	L	D	Y
Template Known Secondary structure															S		G	G	G	T	T									S	S													T
Template Predicted Secondary structure
Template SS confidence
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions