 |
Job Description | P30131 | Confidence | 94.84% | Date | Thu Jan 5 11:45:52 GMT 2012 |
Rank | 25 | Aligned Residues | 78 |
% Identity | 22% | Template | c2zf5O_ |
PDB info |
PDB header:transferase | Chain: O: PDB Molecule:glycerol kinase; |
PDBTitle: crystal structure of highly thermostable glycerol kinase from a2 hyperthermophilic archaeon
|
Resolution | 2.40 Å |
|
 |
  |   |
658 | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | P | V | N | Q | R | A | W | A | F | H | D | A | L | A | Q | G | F | A | A | L | M | R | E | Q | A | T | M | R | G | I | T | T | L | V | F | S | G | G | V | I | H | N | R | L | L | R | A | R | L | A | H | Y | L | A | D | F | T | L | L | F | P | Q | S | L | P | A | G | D | G | G | L | S | L | G | Q | G | V | I |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |   |   |   |
|
|   |
|
|
|   | . |
|   |   |
|   |   |   |   | . | . | . | . |   |   |
|
|   |
|   |
|
|
|   |
|
Template Sequence |   |
G | T | G | R | E | H | L | A | R | A | T | L | E | A | I | A | Y | L | T | R | D | V | V | D | E | M | E | K | L | V | Q | I | K | E | L | R | V | D | G | G | A | T | A | N | D | F | L | M | Q | F | Q | A | D | I | L | . |
N | R | K | V | I | R | P | V | . |
. |
. |
. |
V | K | E | T | T | A | L | G | A | A | Y | L |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
|
|
|  |  |  |  | S | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  | . | T | S |
|  |  |  |  | S | . | . | . | . |
| S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
363 | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | |
. | . | 420 | . | . | . | . | . | |
|
|
|
. | . | . | . | 430 | . | . | . | . | . | . | . |
  |
  |   |
738 | . | 740 |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
A | A | A |
Query Conservation |   |
|   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |   |
Template Sequence |   |
A | G | L |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
438 | . | 440 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|