Job Description P30131 Confidence 48.01% Date Thu Jan 5 11:45:52 GMT 2012 Rank 123 Aligned Residues 63 % Identity 13% Template c2xznF_ PDB info PDB header:ribosome Chain: F: PDB Molecule:eif1; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																				.									.	.	.	.
Query SS confidence																																				.									.	.	.	.
Query Sequence		R	I	R	G	K	V	Q	G	V	G	F	R	P	F	V	W	Q	L	A	Q	Q	L	N	L	H	G	D	V	C	N	D	G	D	G	.	V	E	V	R	L	R	E	D	.	.	.	.	P	E	T	F	L	V	Q	L	Y	Q	H	C	P	P	L	A	R	I	D	S	V
Query Conservation																																				.									.	.	.	.
Alig confidence																																				.									.	.	.	.
Template Conservation
Template Sequence		T	V	E	G	I	P	P	E	F	D	Y	E	K	I	M	K	Y	W	K	K	W	L	S	C	N	A	T	I	V	E	E	D	E	G	K	K	V	I	K	L	N	G	D	H	R	N	Q	I	Q	Q	F	L	S	E	E	G	I	A	A	V	D	N	I	T	I	H	G	I
Template Known Secondary structure								T	T	S		T												T	S								S	T	T								S														S	S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions