Job Description P30131 Confidence 93.35% Date Thu Jan 5 11:45:52 GMT 2012 Rank 40 Aligned Residues 278 % Identity 16% Template c2qm1D_ PDB info PDB header:transferase Chain: D: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase from enterococcus faecalis Resolution 2.02 Å

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.					.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																															.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	D	L	K	N	T	F	C	L	V	R	G	E	Q	A	V	L	S	Q	H	L	G	D	L	S	D	D	G	.	.	.	.	I	Q	M	Q	W	R	E	A	L	R	L	M	Q	N	I	Y	D	F	T	P	Q	Y	V	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	G	T	T	I	K	F	A	I	L	T	T	D	G	V	V	Q	Q	K	W	S	I	E	T	N	I	L	E	D	G	K	H	I	V	P	S	I	I	E	S	I	R	H	R	I	D	L	Y	N	X	K	K	E	D	F	V	G	I	G	X	G	T	P	G	S	V	D	I	E	K	G	T	V	V	G	A	Y	N	L
Template Known Secondary structure				S	S									T	T														T	T	T	T	T	T																T	T			G	G	G									S	S				T	T	T	T					B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	A	H	P	G	Y	V	S	S	Q	W	A	R	E	M	N	L	P	T	Q	T	V	L	H	H	H	A	H	A	A	A	C	L	A	E	H	Q	W	P	L	D	G	G	D	V	I	A	L	T	L	D	G	I	G	M	G	E	N	G	A	L	W	G	G	E	C	L	R	V	N	Y	R	E	C	E	H	L	G	G
Query Conservation		.
Alig confidence		.																																											.								.							.
Template Conservation																																													.								.							.
Template Sequence		N	W	T	T	V	Q	P	V	K	E	Q	I	E	S	A	L	G	I	P	F	A	L	D	N	D	A	N	V	A	A	L	G	E	R	W	K	G	A	G	E	N	N	P	.	D	V	I	F	I	T	L	.	G	T	G	V	G	G	.	G	I	V	A	A	G	K	L	L	H	G	V	A	G	C	A	G	E	V	G	H
Template Known Secondary structure		T	B		S		B												S																			S	T	T	T	T		S	.	S							.	S	S	S				.					T	T						S	S	S		T	T		G	G	G
Template Predicted Secondary structure																																													.								.							.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.		140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	V	A	L	P	G	G	D	L	A	A	K	Q	P	W	R	N	L	L	A	Q	C	L	R	F	V	P	E	W	Q	N	Y	S	E	T	A	S	V	Q	Q	Q	N	W	S	V	L	A	R	A	I	E	R	G	I	N	A	P	L	A	S	S	C	G	R	F	F	D	A	V	A	A	A	L	G	C	A	P	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	P	N	G	F	D	C	T	C	G	K	R	G	C	L	E	T	V	S	S	A	T	G	V	V	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	H	L	S	E	E	F	.	.
Template Known Secondary structure		S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S		B		T	T	S		B	S	B	T					S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G		.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		167	.																									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																	.	.	.	200	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	Y	E	G	E	A	A	C	A	L	E	A	L	A	A	S	C	H	G	V	T	H	P	V	T	M	P	R	V	D	N	Q	L	D	L	A	T	F	W	Q	Q	W	L	N	W	Q	A	P	V	N	Q	R	A	W	A	F	H	D	A	L	A	Q	G	F	A	A	L	M	R	E	Q	A	T	M	R	G	I	T
Query Conservation
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	A	G	D	S	E	L	K	Q	A	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	Q	D	V	S	S	K	D	V	F	E	F	A	E	K	G	.	.	.	.	D	H	F	A	L	X	V	V	D	R	V	C	F	Y	L	G	L	A	T	G	N	L	G	N	T	L	N	P	D
Template Known Secondary structure		.	.		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T															T	.	.	.	.																													S
Template Predicted Secondary structure		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
				205	.	.	.	.	210	.	.	.	.	.																		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		691	.	.	.	.	.	.	.	.	700		.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.					.	.	.	.			.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure												.																							.	.	.	.					.	.
Query SS confidence												.																							.	.	.	.					.	.
Query Sequence		T	L	V	F	S	G	G	V	I	H	.	N	R	L	L	R	A	R	L	A	H	Y	L	A	D	F	T	L	L	F	P	Q	S	.	.	.	.	L	P	A	G	.	.	D	G	G	L	S	L	G	Q	G	V	I	A	A	A	R	W	L
Query Conservation												.																							.	.	.	.					.	.
Alig confidence												.																							.	.	.	.					.	.
Template Conservation
Template Sequence		S	V	V	I	G	G	G	V	S	A	A	G	E	F	L	R	S	R	V	E	K	Y	F	Q	E	F	T	F	P	Q	V	R	N	S	T	K	I	K	L	A	E	L	G	N	E	A	G	V	I	G	A	A	S	L	A	L	Q	F	S	K
Template Known Secondary structure							S	S	G	G	G	G	T														T	S						T	T							S	S	G	G	G										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions