|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | |
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | C | G | V | Q | L | R | I | R | G | K | V | Q | G | V | G | F | R | P | F | V | W | Q | L | A | Q | Q | L | N | L | H | G | D | V | C | N | D | G | D | G | . |
V | E | V | R | L | R | E | D | . |
. |
. |
P | E | T | F | L | V | Q | L | Y | Q | H | C | P | P | L | A | R | I | D | S | V | E | R | E | P | F | I |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |
| . |
|   |
|   |   |   |
|   | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
S | K | V | C | I | I | A | W | V | Y | G | R | V | Q | G | V | G | F | R | Y | T | T | Q | Y | E | A | K | R | L | G | L | T | G | Y | A | K | N | L | D | D | G | S | V | E | V | V | A | C | G | E | E | G | Q | V | E | K | L | M | Q | W | L | K | S | G | G | P | R | S | A | R | V | E | R | V | L | S | E | P | H | H |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
| T | T | T | T |
|
| S |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
| S | S | S |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | T | T | S |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | S | Q | L | P | T | E | F | T | I | R |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
P | S | G | E | L | T | D | F | R | I | R |
Template Known Secondary structure |   |
| S | S |
|
|
|
|
|  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . |
  |