Job Description P30131 Confidence 87.14% Date Thu Jan 5 11:45:52 GMT 2012 Rank 67 Aligned Residues 106 % Identity 8% Template c1z05A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, rok family; PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein. Resolution 2.00 Å

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		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700		.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	H	P	V	T	M	P	R	V	D	N	Q	L	D	L	A	T	F	W	Q	Q	W	L	N	W	Q	A	P	V	N	Q	R	A	W	A	F	H	D	A	L	A	Q	G	F	A	A	L	M	R	E	Q	A	T	M	R	G	I	T	T	L	V	F	S	G	G	V	I	H	.	N	R	L	L	R	A	R	L	A	H	Y
Query Conservation																																																																						.
Alig confidence																											.	.	.	.																																								.
Template Conservation																											.	.	.	.
Template Sequence		A	G	E	P	S	C	L	A	T	V	E	E	I	S	I	E	D	I	C	A	A	A	A	D	G	.	.	.	.	D	P	L	A	V	D	V	I	Q	Q	L	G	R	Y	L	G	A	A	I	A	I	V	I	N	L	F	N	P	E	K	I	L	I	G	G	V	I	N	Q	A	K	S	I	L	Y	P	S	I	E	Q	C
Template Known Secondary structure		T	T				T	T	T	T		S	S												T	T	.	.	.	.																													S						S	G	G	G	G	G
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		712	.	.	.	.	.	.	.	720	.	.	.	.	.							.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		L	A	D	F	T	L	L	F	P	Q	S	L	P	A	.	.	.	.	.	.	G	D	G	G	L	S	L	G	Q	G	V	I	A	A	A	R	W
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	E	Q	S	L	P	V	Y	H	Q	D	L	K	L	V	E	S	R	F	Y	K	Q	A	T	M	P	G	A	A	L	I	K	Q	A	L	Y
Template Known Secondary structure						S						T	T							S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions