Return to main results Retrieve Phyre Job Id

Job DescriptionP52096
Confidence99.85%DateThu Jan 5 12:05:16 GMT 2012
Rank17Aligned Residues123
% Identity14%Templatec3e5dA_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative glyoxalase i; PDBTitle: crystal structure of a putative glyoxalase i (lmof2365_0426) from2 listeria monocytogenes str. 4b f2365 at 2.70 a resolution
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.. .......80..
Predicted Secondary structure 
































..


Query SS confidence 



































































. .









Query Sequence  KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPE. . ACGLRHLAFS
Query Conservation    
 

 
 
 
   
  

   

                                           ..          
Alig confidence 



































































..









Template Conservation   

 

 
 
 
   
  

  


                                                       
Template Sequence  XKIEHVALWTTNLEQXKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIXSRTDVTGKTTGENLGWAHIAISTGT
Template Known Secondary structure 




SS




GGGT
SSS
TT





SS
SS



SS
Template Predicted Secondary structure 






































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   83......90.........100.........110.........120.......
Predicted Secondary structure 


















Query SS confidence 












































Query Sequence  VDDIDAAVAHLESHNVKCETIRVDPYTQKRFTFFNDPDGLPLELY
Query Conservation            
   
                    



  


 
Alig confidence 












































Template Conservation                
            
       



  


 
Template Sequence  KEAVDELTEKLRQDGFAIAGEPRXTGDGYYESVVLDPEGNRIEIT
Template Known Secondary structure  TT


TTS

TTS
Template Predicted Secondary structure 




















Template SS confidence 












































   81........90.........100.........110.........120.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions