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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | I | F | S | K | I | I | R | R | E | I | P | S | D | I | V | Y | Q | D | D | L | V | T | A | F | R | D | I | S | P | Q | A | P | T | H | I | L | I | I | P | N | I | L | I | P | T | V | N | D | V | S | A | E | H | E | Q | A | L | G | R | M | I | T | V | A | A | K | I | A | E | Q | E | G | I | A | E | D | G | Y | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
C | T | F | C | S | I | I | N | R | E | L | E | G | Y | F | V | Y | E | D | E | K | F | A | A | I | L | D | K | Y | P | V | S | L | G | H | T | L | V | I | P | K | K | H | F | E | N | Y | L | E | A | D | E | D | T | L | A | E | L | A | K | V | V | K | L | V | S | L | G | I | K | D | A | . |
V | K | A | D | G | L | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T | S | S |
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| S | S |  |  |  |  |  |
| S | S |
| S | S | T | T |
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| S | S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
. | . | . | . | . | . | . |
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | I | M | N | T | N | R | H | G | G | Q | E | V | Y | H | I | H | M | H | L | L | G | G | R | P | L | G | P | M | L | A | H | K | G |
Query Conservation |   |
  |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |
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|   |   |   |   |   |   |   |
Template Sequence |   |
L | L | T | N | I | G | R | S | A | G | Q | V | I | F | H | L | H | V | H | I | I | P | T | W | E | G | D | Y | P | D | I | F | K | S |
Template Known Secondary structure |   |
 |  |
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| S | G | G | G | T |
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| S |
| S |
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|  |  |  |  |  |  |
| S | S |
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| T | T | S |
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Template Predicted Secondary structure |   |
 |  |  |  |
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Template SS confidence |   |
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
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