 |
Job Description | P60651 | Confidence | 8.25% | Date | Thu Jan 5 12:07:00 GMT 2012 |
Rank | 68 | Aligned Residues | 64 |
% Identity | 22% | Template | d2d5ra1 |
SCOP info | Ribonuclease H-like motif
| Ribonuclease H-like
| CAF1-like ribonuclease
|
Resolution | 2.50 |
|
 |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
. | . | . | . | . | . | . | . | 270 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |
|  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | N | D | R | S | V | D | D | V | I | A | Q | V | K | Q | I | V | G | D | M | P | V | Y | L | T | F | D | I | D | C | L | D | P | A | F | A | P | G | T | . |
. |
G | T | P | V | I | G | G | L | T | S | D | R | A | I | K | L | V | R | G | . |
L | K | D | L | N | I | V | G | M | D | V | V |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   | . | . |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|
|   |   | . |
|   |   |   |   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . |
|
|
|
|
| . | . | . | . | . | . |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|
|
|   |
|
|
|
Template Sequence |   |
E | V | W | A | C | N | L | D | E | E | M | K | K | I | R | Q | V | I | R | K | Y | N | . |
Y | V | A | M | D | . |
. |
. |
. |
. |
. |
T | E | F | P | G | V | V | A | R | P | I | G | E | F | R | S | N | A | D | Y | Q | Y | Q | L | L | R | C | N | V | D | L | L | K | I | I | Q | L | G | L | T |
Template Known Secondary structure |   |
 |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
| S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|