|   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | A | F | G | F | L | R | L | P | M | N | F | Q | P | Y | D | S | D | A | D | W | V | I | T | G | V | P | F | D | M | A | T | . |
. |
. |
S | G | R | A | G | G | R | H | G | P | A | A | I | R | Q | V | S | T | N | L | A | W | E | H | N | R | F | P | W | N | F | D | M | R | E | R | L | N | V | V | D | C | G | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|   |
|   |
|   | . | . | . |   |   |
|   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
T | D | D | P | R | L | L | S | L | F | . |
. |
S | A | Q | R | E | E | D | A | D | I | V | I | I | G | F | P | Y | D | E | G | C | V | R | N | G | G | R | A | G | A | K | K | G | P | A | A | F | R | F | F | L | Q | R | L | G | S | V | N | N | L | E | . |
. |
L | N | V | D | A | S | H | L | K | L | Y | D | A | G | D |
Template Known Secondary structure |   |
|
| S |
| B | G | G | G | G |
| . | . |
|
| S | S | G | G | G |
| S |  |  |  |  |  |  |
|
|
|  |  |  |  |  | T | T |
|
| S |
| G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|
| B | S |  |  | T | T | . | . | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | |
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
. | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | Y | A | F | G | D | A | R | E | M | S | E | K | L | Q | A | H | A | E | K | L | L | A | A | G | K | R | M | L | S | F | G | G | D | H | F | V | T | L | P | L | L | R | A | H | A | K | H | F | . |
G | K | M | A | L | V | H | F | D | A | H | T | D | T | Y | A | N | . |
. |
G | C | E | F | D | H | G | T | M | F |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |   | . | . |   |   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
I | T | A | . |
. |
S | T | L | E | E | A | H | E | K | L | E | S | K | V | F | T | V | L | A | R | G | A | F | P | F | V | I | G | G | G | N | D | Q | S | A | P | N | G | R | A | M | L | R | A | F | P | G | D | V | G | V | I | N | V | D | S | H | L | D | V | R | P | P | L | Q | D | G | R | V | H | S | G | T | P | F |
Template Known Secondary structure |   |
|
|
| . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |
| S | S |
|
|
|
|
|
|
| T | T | S |
|
|
| T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | |
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | T | A | P | K | E | G | L | I | D | P | N | H | S | V | Q | I | G | I | R | T | . |
. |
. |
. |
. |
. |
. |
. |
E | F | D | K | D | N | G | F | T | V | L | D | A | C | Q | V | N | D | R | S | V | D | D | V | I | A | Q | V | K | Q | I | V | G | D | M | P | V | Y | L | T | F | D | I | D | C | L | D | P | A | F | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
R | Q | L | L | E | E | S | S | F | S | G | K | R | F | V | E | F | A | C | Q | G | S | Q | C | G | A | L | H | A | Q | Y | V | R | D | H | Q | G | H | L | M | W | L | S | E | V | R | K | K | G | A | V | A | A | L | E | D | A | F | G | L | T | . |
G | K | N | T | F | F | S | F | D | V | D | S | L | K | S | S | D | M |
Template Known Secondary structure |   |
 |  |  |  | T |
| T | T |
|
| G | G | G |  |  |  |  |  |  |
| T | T | T | S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | . |
| S | S |  |  |  |  |  |  | G | G | G | B | B | T | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
  |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
. | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | T | G | T | P | V | I | G | G | L | T | S | D | R | A | I | K | L | V | R | G | L | . |
K | D | L | N | I | V | G | M | D | V | V | E | V | A | P | A | Y | D | Q | S | E | I | T | A | L | A | A | A | T | L | A | L | E | M | L | Y | I | Q | A | A | K |
Query Conservation |   |
|
|   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |
| . |   |   |   |   |
|
|
|   |
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |   |
| . |   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
P | G | V | S | C | P | A | A | V | G | L | S | A | Q | E | A | F | D | M | C | F | L | A | G | K | T | P | T | V | M | M | M | D | M | S | E | L | N | P | L | V | E | . |
E | Y | R | S | P | R | V | A | V | Y | M | F | Y | H | F | V | L | G | F | A | T | R |
Template Known Secondary structure |   |
|
| B | S | S |
| B | S | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
| B |
| T | T | T |
| . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
246 | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
. | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
  |