 |
Job Description | P60651 | Confidence | 6.97% | Date | Thu Jan 5 12:07:00 GMT 2012 |
Rank | 83 | Aligned Residues | 88 |
% Identity | 10% | Template | c3outC_ |
PDB info |
PDB header:isomerase | Chain: C: PDB Molecule:glutamate racemase; |
PDBTitle: crystal structure of glutamate racemase from francisella tularensis2 subsp. tularensis schu s4 in complex with d-glutamate.
|
Resolution | 1.65 Å |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | D | M | A | T | S | G | R | A | G | G | R | H | G | P | A | A | I | R | Q | V | S | T | N | L | A | W | E | H | N | R | F | P | W | N | F | D | M | R | E | R | L | N | V | V | D | C | G | D | L | V | Y | A | F | G | D | A | R | E | M | S | E | K | L | Q | A | H | A | E | K | L | L | A | A | G | K | R | M | L | S |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
| . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|
Template Sequence |   |
F | D | S | G | I | G | G | L | . |
. |
. |
. |
. |
. |
. |
T | I | V | K | N | L | X | S | I | L | P | N | E | D | I | I | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | G | D | I | A | R | I | P | Y | G | T | K | S | R | A | T | I | Q | K | F | A | A | Q | T | A | K | F | L | I | D | Q | E | V | K | A | I | I |
Template Known Secondary structure |   |
 |  | S | S | S | T | T |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
| T | T | T |
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | G | G | D | H | F | V | T | L | P | L | L | R | A | H | A | K | H | F | G | K | M | A | L | V | H | F |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
I | A | . |
C | N | T | I | S | A | I | A | K | D | I | V | Q | E | I | A | K | A | I | P | V | I | D | V |
Template Known Secondary structure |   |
 |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|