Job Description P60651 Confidence 100.00% Date Thu Jan 5 12:07:00 GMT 2012 Rank 3 Aligned Residues 290 % Identity 40% Template c3nioF_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:guanidinobutyrase; PDBTitle: crystal structure of pseudomonas aeruginosa guanidinobutyrase Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.													.
Query SS confidence																.	.	.	.													.
Query Sequence		G	H	Q	Y	D	N	S	L	V	S	N	A	F	G	.	.	.	.	F	L	R	L	P	M	N	F	Q	P	Y	D	.	S	D	A	D	W	V	I	T	G	V	P	F	D	M	A	T	S	G	R	A	G	G	R	H	G	P	A	A	I	R	Q	V	S	T	N	L	A	W	E	H	N	R	F	P	W	N	F	D	M
Query Conservation																.	.	.	.													.
Alig confidence																.	.	.	.													.																																												.	.
Template Conservation																																																																												.	.
Template Sequence		L	H	Q	P	L	G	G	N	E	M	P	R	F	G	G	I	A	T	M	M	R	L	P	H	V	Q	S	P	A	E	L	D	A	L	D	A	A	F	V	G	V	P	L	D	I	G	T	S	L	R	S	G	T	R	F	G	P	R	E	I	R	A	E	S	V	M	I	R	P	Y	N	M	A	T	.	.	G	A	A	P
Template Known Secondary structure								T	T	T	S		T	T		S				G	G	G			B								T	T		S										T	T		S	S				G	G	G									G	G	G			S			T	T	T	.	.		B		G
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	R	L	N	V	V	D	C	G	D	L	V	Y	A	F	G	D	A	R	E	M	S	E	K	L	Q	A	H	A	E	K	L	L	A	A	G	K	R	M	L	S	F	G	G	D	H	F	V	T	L	P	L	L	R	A	H	A	K	H	F	G	K	M	A	L	V	H	F	D	A	H	T	D	T	Y	A	N	G	C
Query Conservation
Alig confidence																																																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence		F	D	S	L	N	V	A	D	I	G	D	V	A	I	N	T	F	N	L	L	E	A	V	R	I	I	E	Q	E	Y	D	R	I	L	G	H	G	I	L	P	L	T	L	G	G	D	H	T	I	T	L	P	I	L	R	A	I	.	.	.	K	H	G	V	G	L	V	H	V	D	A	H	A	D	V	N	D	H	M	F
Template Known Secondary structure		G	G	T													T	T																			T	T										G	G	G									.	.	.											S	S					S		S	T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure			.																																		.	.	.	.	.	.	.
Query SS confidence			.																																		.	.	.	.	.	.	.
Query Sequence		E	.	F	D	H	G	T	M	F	Y	T	A	P	K	E	G	L	I	D	P	N	H	S	V	Q	I	G	I	R	T	E	F	D	K	D	.	.	.	.	.	.	.	N	G	F	T	V	L	D	A	C	Q	V	N	D	R	S	V	D	D	V	I	A	Q	V	K	Q	I	V	G	D	M	P	V	Y	L	T	F	D	I
Query Conservation			.																																		.	.	.	.	.	.	.
Alig confidence			.																																		.	.	.	.	.	.	.														.												.
Template Conservation																																																									.												.
Template Sequence		G	E	I	A	H	G	T	T	F	R	R	A	V	E	E	D	L	L	D	C	D	R	V	V	Q	I	G	L	R	A	Q	G	Y	T	A	E	D	F	N	W	S	R	Q	G	F	R	V	V	Q	A	E	E	C	W	H	.	S	L	E	P	L	M	A	E	V	R	E	.	V	G	G	G	P	V	Y	L	S	F	D	I
Template Known Secondary structure		T				T	T	S								T	T		S		G	G	G								S			S	S	T					T	T									G	G	G	T			.			T	T								.			S	S								G
Template Predicted Secondary structure																																																									.												.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	L	D	P	A	F	A	P	G	T	G	T	P	V	I	G	G	L	T	S	D	R	A	I	K	L	V	R	G	L	K	D	L	N	I	V	G	M	D	V	V	E	V	A	P	A	Y	D	Q	S	E	I	T	A	L	A	A	A	T	L	A	L	E	M	L	Y	I	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	I	D	P	A	W	A	P	G	T	G	T	P	E	I	G	G	L	T	T	I	Q	A	M	E	I	I	R	G	C	Q	G	L	D	L	I	G	C	D	L	V	E	V	S	P	P	Y	D	T	T	G	N	T	S	L	L	G	A	N	L	L	Y	E	M	L	C	V	L	P
Template Known Secondary structure		G	G	B		T	T	T				B	S	S			S	S		B											T	T	T	T	S										B		G	G	G		S	S	S																T	S	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions