Job Description P60651 Confidence 100.00% Date Thu Jan 5 12:07:00 GMT 2012 Rank 5 Aligned Residues 272 % Identity 27% Template c3lhlA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative agmatinase; PDBTitle: crystal structure of a putative agmatinase from clostridium difficile Resolution 2.30 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	S	D	A	D	W	V	I	T	G	V	P	F	D	M	A	T	S	G	R	A	G	G	R	H	G	P	A	A	I	R	Q	V	S	T	N	L	A	W	E	H	N	R	F	P	W	N	F	D	M	R	E	R	L	N	V	V	D	C	G	D	L	V	Y	A	F	G	D	A	R	E	M	S	E	K	L	Q	A	H
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		N	Y	E	E	S	N	L	I	V	F	G	V	G	F	D	G	T	T	S	N	R	P	G	A	R	F	A	S	S	S	X	R	K	E	F	Y	G	L	E	T	Y	S	P	F	L	D	L	D	L	E	.	.	.	D	Y	N	I	C	D	Y	G	D	L	E	I	S	V	G	S	T	E	Q	V	L	K	E	I	Y	Q	E
Template Known Secondary structure			T	T	T		S										T	T			S	S			G	G	G										T	T	S		S			T	T	T	T			G	G	.	.	.	G	S												S	S
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		A	E	K	L	L	A	A	G	K	R	M	L	S	F	G	G	D	H	F	V	T	L	P	L	L	R	A	H	A	K	H	F	G	K	M	A	L	V	H	F	D	A	H	T	D	T	Y	A	N	.	.	G	C	E	F	D	H	G	T	M	F	Y	T	A	P	K	E	G	L	I	D	P	N	H	S	V	Q	I	G	I
Query Conservation																																																			.	.
Alig confidence																																																			.	.																		.	.
Template Conservation																																																																						.	.
Template Sequence		T	Y	K	I	V	R	D	S	K	V	P	F	X	I	G	G	E	H	L	V	T	L	P	A	F	K	A	V	H	E	K	Y	N	D	I	Y	V	I	H	F	D	A	H	T	D	L	R	E	E	Y	N	N	S	K	N	S	H	A	T	V	I	K	R	I	W	D	I	V	.	.	G	D	N	K	I	F	Q	F	G	I
Template Known Secondary structure								T	T								S	S	G	G	G													S	S								S	B					S		B	T	T	B	S	S	S	T	T	T										.	.		T	T	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		R	T	E	F	D	K	D	N	G	F	T	V	L	D	A	C	Q	V	N	D	R	S	V	D	D	V	I	A	Q	V	K	Q	I	V	G	D	M	P	V	Y	L	T	F	D	I	D	C	L	D	P	A	F	A	P	G	T	G	T	P	V	I	G	G	L	T	S	D	R	A	I	K	L	V	R	G	L	.	K	D	L
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		R	S	G	T	K	E	E	F	K	F	A	T	E	E	K	H	T	Y	X	E	I	G	G	I	D	T	F	E	N	I	V	N	X	L	N	G	K	N	I	Y	L	T	I	D	L	D	V	L	D	A	S	V	F	P	G	T	G	T	P	E	P	G	G	V	N	Y	R	E	F	Q	E	I	F	K	I	I	K	N	S	N
Template Known Secondary structure			B											T	S		S	S					T			T	T								T	T	T									G	G	G	B		T	T	T			S	B	S	S			S	S		B						T								T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
			266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	I	V	G	M	D	V	V	E	V	A	P	A	Y	D	Q	S	E	I	T	A	L	A	A	A	T	L	A	L	E	M	L	Y	I	Q	A	A	K	K	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		I	N	I	V	G	C	D	I	V	E	L	S	P	D	Y	D	T	T	G	V	S	T	V	I	A	C	K	I	L	R	E	L	C	L	I	I	S	D	K	I	K
Template Known Secondary structure												B		G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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