Job Description P03813 Confidence 27.12% Date Thu Jan 5 10:58:00 GMT 2012 Rank 241 Aligned Residues 171 % Identity 12% Template d3bofa2 SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 1.70

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.		.	.	.	.	.	90
Predicted Secondary structure																																																																					.	.	.				.
Query SS confidence																																																																					.	.	.				.
Query Sequence		T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	.	.	.	C	T	N	.	T	M	H	K	V	A
Query Conservation																																																																					.	.	.				.
Alig confidence																				.	.	.																																															.	.	.				.
Template Conservation																				.	.	.
Template Sequence		L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	.	.	.	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F	E	E	F	Y	E	N	F	R	E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V
Template Known Secondary structure																		T	T	.	.	.	S										S			B	T	T	T	S	S	B																			T	T		S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.		.	.	100	.	.	.															.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		D	A	I	E	S	R	C	.	T	L	P	F	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	.	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I	N	C	L	I	P	E	A	D	E	R
Query Conservation									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D	A	L	G	I	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	K	P
Template Known Secondary structure									S	S	S										T	T	S			T	T													T	S	S		S						S	S	S															T			S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																					.
Template Conservation										.	.	.	.	.	.	.	.																					.
Template Sequence		I	V	E	N	G	K	T	V	.	.	.	.	.	.	.	.	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	.	N	I	F	G	G	C
Template Known Secondary structure					T	T				.	.	.	.	.	.	.	.										T	T							T	T		.	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																					.
Template SS confidence
		239	240	.	.	.	.	.	.									.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions