Job Description P03813 Confidence 88.04% Date Thu Jan 5 10:58:00 GMT 2012 Rank 45 Aligned Residues 184 % Identity 8% Template c3sg0A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 Resolution 1.20 Å

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		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		T	I	G	L	L	G	G	M	.	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L
Query Conservation										.
Alig confidence										.							.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	G	I	T	X	S	A	S	G	P	G	A	A	L	.	.	G	Q	P	Q	S	K	T	V	A	A	L	P	K	E	I	G	.	.	.	.	.	.	.	.	.	.	.	G	E	K	V	T	Y	F	A	L	D	D	E	S	D	P	T	K	A	A	Q	N	A	R	K	L	L	S	E	E	K	V	D	V	L	I	G
Template Known Secondary structure										S	S	T	T				.	.								G	G	G	S		S			T	.	.	.	.	.	.	.	.	.	.	.	T											T	T															T	S			S
Template Predicted Secondary structure																	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure									.																										.																																		.	.
Query SS confidence									.																										.																																		.	.
Query Sequence		C	T	N	T	M	H	K	.	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	A	D	A	T	G	R	A	I	T	.	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I	N	C	.	.	L	I	P	E	A	D	E	R	A	K	I
Query Conservation									.																										.																																		.	.
Alig confidence									.																										.																																		.	.
Template Conservation
Template Sequence		S	S	L	T	P	V	S	L	P	L	I	D	I	A	A	E	A	K	T	P	L	X	T	X	A	A	A	A	I	L	V	A	P	X	D	E	R	R	K	W	V	Y	K	V	V	P	N	D	D	I	X	A	E	A	I	G	K	Y	I	A	K	T	G	A	K	K	V	G	Y	I	G	F	S	D	A	Y	G	E	G	Y
Template Known Secondary structure			S	S														T	T										G	G	G	T		S			T	T	G	G	G					S																	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		N	Q	I	I	F	E	E	L	C	L	G	Q	F	.	.	.	.	.	.	.	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T	E
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	V	L	A	A	A	A	P	K	L	G	F	E	L	T	T	H	E	V	Y	A	R	S	D	A	S	V	T	G	Q	V	L	K	I	I	A	T	K	P	D	A	V	F	I	A	S	A	G
Template Known Secondary structure													T											T	T		S												T			S								S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions