Job Description P03813 Confidence 70.56% Date Thu Jan 5 10:58:00 GMT 2012 Rank 81 Aligned Residues 118 % Identity 14% Template c3kg2A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:glutamate receptor 2; PDBTitle: ampa subtype ionotropic glutamate receptor in complex with competitive2 antagonist zk 200775 Resolution 3.60 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C	.	T	N	T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T
Query Conservation																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	A	F	C	S	Q	F	S	R	G	V	Y	A	I	F	G	F	Y	D	K	K	S	V	N	T	I	T	S	F	C	G	T	L	H	V	S	F	I	T	P	S	F	P	T	D	G	T	H	P	F	V	I	Q	M	R	P	D	L	K	G	A	L	L	S	L	I	E	Y	Y	Q	W	D	K	F	A	Y	L	Y	D
Template Known Secondary structure											T	T		S								T	T	T											T	T							S				S	S			S	S					S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		126			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		R	.	.	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I	N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T
Query Conservation			.	.
Alig confidence			.	.																.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	R	G	L	S	T	L	Q	A	V	L	D	S	A	A	E	K	.	K	W	Q	V	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	V	G	N	I	N	N	D	K	K	D	E	T	Y	R	S	L	F	Q	D	L	E	L	K	K	E	R	R	V	I	L	D	C	E
Template Known Secondary structure		G	G	G		T													T	.	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S			S	S	S	T	T	T	T	T	T	T					T	T	T	T	T
Template Predicted Secondary structure																				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions