Job Description P03813 Confidence 75.08% Date Thu Jan 5 10:58:00 GMT 2012 Rank 69 Aligned Residues 206 % Identity 15% Template c3k9cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family protein; PDBTitle: crystal structure of laci transcriptional regulator from rhodococcus2 species. Resolution 2.14 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L
Query Conservation
Alig confidence												.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	G	V	V	F	E	L	Q	.	.	.	.	Q	P	F	H	G	D	L	V	E	Q	I	Y	A	A	A	T	R	R	G	Y	D	V	X	L	S	A	V	A	P	S	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	V	A	V	Q	A	L	X	R	E	R	C	E	A	A	I	L
Template Known Secondary structure										T	T	.	.	.	.																		T	T									B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T
Template Predicted Secondary structure												.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		C	T	N	T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																	.
Template Sequence		L	G	T	R	F	D	T	D	E	L	G	A	L	A	D	.	R	V	P	A	L	V	V	A	R	A	S	G	L	P	G	V	G	A	V	R	G	D	D	V	A	G	I	T	L	A	V	D	H	L	T	E	L	G	H	R	N	I	A	H	I	D	G	A	D	A	P	G	G	A	D	R	R	A	G	F	L	A	A	X
Template Known Secondary structure			T													T	.	T	S						S	S			S	S	T	T	S																					T	T			S							T	T	S	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
			141	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.						.	.	.																									.	.	.	.	.	.	.																				.
Query SS confidence		.						.	.	.																									.	.	.	.	.	.	.																				.
Query Sequence		.	Q	F	S	I	N	.	.	.	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	.	.	.	.	.	.	.	F	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	.	G	A	Q	G	V	I	F	G	C	T	E	I	G	L	L	V	P	E	E	R
Query Conservation		.						.	.	.																									.	.	.	.	.	.	.																				.
Alig confidence		.						.	.	.																									.	.	.	.	.	.	.																				.																.
Template Conservation																																																																													.
Template Sequence		D	R	H	G	L	S	A	S	A	T	V	V	T	G	G	T	T	E	T	E	G	A	E	G	X	H	T	L	L	E	X	P	T	P	P	T	A	V	V	A	F	N	D	R	C	A	T	G	V	L	D	L	L	V	R	S	G	R	D	V	P	A	D	I	S	V	V	G	Y	D	D	S	R	L	A	.	R	I	P	H
Template Known Secondary structure				T	T		G	G	G								S	S													T	S	S	S			S					S	S														T	T			T	T	T	T										T	T	T	.	T		T	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.
		209	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	V	L	P	V	F	D	.	T	A	A	I	H	A	E	D	A	V	A	F	M	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		V	Q	X	T	T	I	S	Q	D	A	T	H	X	A	E	A	A	V	D	G	A	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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