Job Description P03813 Confidence 35.69% Date Thu Jan 5 10:58:00 GMT 2012 Rank 177 Aligned Residues 201 % Identity 11% Template c3jvdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcription regulation repressor (laci2 family) from corynebacterium glutamicum Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C	T	N
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	G	V	I	V	P	D	L	S	N	E	Y	Y	S	E	S	L	Q	T	I	Q	Q	D	L	K	A	A	G	Y	Q	M	L	V	A	E	A	N	S	V	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	V	V	M	E	S	L	I	S	I	Q	A	A	G	I	I	H	V	P	V
Template Known Secondary structure									S		S	S	S																		T										S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	.	.	.	.	.	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		V	G	S	.	.	.	.	.	.	.	I	A	E	G	I	P	M	V	Q	L	T	R	P	G	F	P	R	V	L	C	D	D	E	A	G	F	F	Q	L	T	E	S	V	L	G	G	S	G	M	N	I	A	A	L	V	G	E	E	S	L	S	T	T	Q	E	R	M	R	G	I	S	H	A	A	S	I	Y	G	A	E
Template Known Secondary structure		T	T		.	.	.	.	.	.	.					S										S																					S	S	S								S		T	T	S																	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		129	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.
Predicted Secondary structure																												.	.	.	.	.	.	.																																														.
Query SS confidence																												.	.	.	.	.	.	.																																														.
Query Sequence		N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	.	.	.	.	.	.	.	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T	E	I	G	L	L	V	P	E	E	R	S	V	L	P	V	F	D	.	T
Query Conservation																												.	.	.	.	.	.	.																																														.
Alig confidence																												.	.	.	.	.	.	.																																.														.
Template Conservation																																																																		.
Template Sequence		V	T	F	H	F	G	H	Y	S	V	E	S	G	E	E	M	A	Q	V	V	F	N	N	G	L	P	D	A	L	I	V	A	S	P	R	L	M	A	G	V	M	R	A	F	T	R	L	N	V	R	V	P	H	D	V	V	I	G	G	Y	D	D	P	E	.	W	Y	S	F	V	G	A	G	I	T	T	F	V	P	P
Template Known Secondary structure									S	S														T				S																				T	T			T	T	T	T							S			G	.	G	G	G	G	S	T	T	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	H	A	E	D	A	V	A	F	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	E	M	G	K	E	A	V	R	L	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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