Job Description P03813 Confidence 26.13% Date Thu Jan 5 10:58:00 GMT 2012 Rank 249 Aligned Residues 133 % Identity 13% Template c3ip5A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter, substrate binding protein (amino acid); PDBTitle: structure of atu2422-gaba receptor in complex with alanine Resolution 1.35 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C	T	N	T	M	H	K	.	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S
Query Conservation																										.
Alig confidence																										.																		.
Template Conservation																																												.
Template Sequence		I	S	V	A	N	K	F	V	A	D	G	V	K	F	V	V	G	H	F	N	S	G	V	S	I	P	A	S	E	V	Y	A	E	N	G	I	L	E	I	T	P	A	.	A	T	N	P	V	F	T	E	R	G	L	W	N	T	F	R	T	C	G	R	D	D	Q	Q	G	G	I	A	G	K	Y	L	A	D	H	F	K
Template Known Secondary structure											T	T								S	S														T	T						S	S	.				G	G	G	G	S	S			T	T				S	S																			T
Template Predicted Secondary structure																																												.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
					144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																												.	.	.	.	.	.	.
Query SS confidence		.	.	.																												.	.	.	.	.	.	.
Query Sequence		.	.	.	I	N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	.	.	.	.	.	.	.	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T
Query Conservation		.	.	.																												.	.	.	.	.	.	.
Alig confidence		.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	K	V	A	I	I	H	D	K	T	P	Y	G	Q	G	L	A	D	E	T	K	K	A	A	N	A	A	G	V	T	E	V	M	Y	E	G	V	N	V	G	D	K	D	F	S	A	L	I	S	K	M	K	E	A	G	V	S	I	I	Y	W	G	G	L
Template Known Secondary structure		T									S	S																	T	T				S							T	T														T	T								S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions