Job Description P03813 Confidence 38.97% Date Thu Jan 5 10:58:00 GMT 2012 Rank 162 Aligned Residues 211 % Identity 11% Template c3gv0A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of laci family transcription regulator from2 agrobacterium tumefaciens Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L
Query Conservation
Alig confidence								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	I	A	L	V	.	L	S	V	D	E	E	L	X	G	F	T	S	Q	X	V	F	G	I	T	E	V	L	S	T	T	Q	Y	H	L	V	V	T	P	H	I	H	A	K	D	S	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	I	R	Y	I	L	E	T	G	S	A	D	G	V	I	I
Template Known Secondary structure								.		B					S	S															T	T	S	S								B	S	S	G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T			S
Template Predicted Secondary structure								.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query Sequence		C	T	N	T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	Q	D	.	.	.	.	.	F	Y	R	G	R
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		S	K	I	E	P	N	D	P	R	V	R	F	X	T	E	R	N	X	P	F	V	T	H	G	R	S	D	X	G	I	E	H	A	F	H	D	F	D	N	E	A	Y	A	Y	E	A	V	E	R	L	A	Q	C	G	R	K	R	I	A	V	I	V	P	P	S	R	F	S	F	H	D	H	A	R	K	G	F	N	R	G
Template Known Secondary structure			S			T	T										T	T							S				S	S																								T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		138	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																													.	.	.	.	.	.	.																				.
Query SS confidence						.	.	.																													.	.	.	.	.	.	.																				.
Query Sequence		L	T	E	Q	.	.	.	F	S	I	N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	.	.	.	.	.	.	.	F	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	.	G	A	Q	G	V	I	F	G	C	T	E	I	G	L	L	V	P	E
Query Conservation						.	.	.																													.	.	.	.	.	.	.																				.
Alig confidence						.	.	.																													.	.	.	.	.	.	.																				.																.
Template Conservation																																																																															.
Template Sequence		I	R	D	F	G	L	T	E	F	P	I	D	A	V	T	I	E	T	P	L	E	K	I	R	D	F	G	Q	R	L	X	Q	S	S	D	R	P	D	G	I	V	S	I	S	G	S	S	T	I	A	L	V	A	G	F	E	A	A	G	V	K	I	G	E	D	V	D	I	V	S	K	Q	S	A	E	F	L	.	N	W
Template Known Secondary structure					T	T								S			T	T	S													T	T	S	S	S			S					S														T	T	T			T	T	T	S								S	S	T	T		.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.
		207	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		E	R	S	V	L	P	V	F	D	.	T	A	A	I	H	A	E	D	A	V	A	F	M	L
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		I	K	P	Q	I	H	T	V	N	E	D	I	K	L	A	G	R	E	L	A	K	A	L	L
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions