Job Description P03813 Confidence 66.75% Date Thu Jan 5 10:58:00 GMT 2012 Rank 91 Aligned Residues 207 % Identity 14% Template c3e61A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative transcriptional repressor of ribose operon; PDBTitle: crystal structure of a putative transcriptional repressor of ribose2 operon from staphylococcus saprophyticus subsp. saprophyticus Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C	T
Query Conservation
Alig confidence						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	L	L	.	.	.	L	P	D	M	S	N	P	F	F	T	L	I	A	R	G	V	E	D	V	A	L	A	H	G	Y	Q	V	L	I	G	N	S	D	N	D	I	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	G	Y	L	A	T	F	V	S	H	N	C	T	G	M	I	S	T	A
Template Known Secondary structure						.	.	.		S		T	T	S																	T	T									T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S						G
Template Predicted Secondary structure						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																										.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		N	T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	A	D	A	.	.	.	.	.	.	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	.	.	.	.	.	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I	N	C	L	I	P	E	A	D
Query Conservation																										.	.	.	.	.	.																		.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																		.	.	.	.	.															.
Template Conservation																																																																				.
Template Sequence		F	N	E	N	I	I	E	N	T	L	T	D	H	I	P	F	V	F	I	D	R	I	N	H	F	K	G	G	Q	L	Q	A	E	V	V	R	K	G	K	G	K	N	V	L	I	V	H	E	N	L	L	I	D	A	F	H	Q	R	V	Q	G	I	K	Y	I	L	.	D	Q	D	Y	K	M	L	E	A	T	L	L	D
Template Known Secondary structure		G	G																	G	G	G																	T	T			S						S		T	T	S															.									G	G	G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																														.
Query SS confidence																				.	.	.																																														.
Query Sequence		E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	.	.	.	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T	E	I	G	L	L	V	P	E	E	R	S	V	L	P	V	F	D	.	T	A	A	I	H	A	E	D	A	V	A	F	M
Query Conservation																				.	.	.																																														.
Alig confidence																				.	.	.																																.														.
Template Conservation																																																						.
Template Sequence		N	D	K	K	F	I	D	L	I	K	E	L	S	I	D	S	I	I	C	S	N	D	L	L	A	I	N	V	L	G	I	V	Q	R	Y	H	F	K	V	P	A	E	I	Q	I	I	G	Y	D	N	I	P	.	F	S	E	M	T	Y	P	Q	I	T	T	I	D	Q	S	A	Y	H	L	G	E	I	A	V	S	Q	L
Template Known Secondary structure		S												T							S	S														T	T			T	T	T	T						S	B			G	.	G	G	G	T	S	S	S			B
Template Predicted Secondary structure																																																						.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		229	230
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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