Job Description P03813 Confidence 100.00% Date Thu Jan 5 10:58:00 GMT 2012 Rank 3 Aligned Residues 225 % Identity 34% Template c2zskA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:226aa long hypothetical aspartate racemase; PDBTitle: crystal structure of ph1733, an aspartate racemase2 homologue, from pyrococcus horikoshii ot3 Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		M	K	K	I	G	I	I	G	G	T	T	P	E	S	T	L	Y	Y	Y	K	K	Y	I	E	I	S	R	E	K	F	E	K	Y	F	Y	P	E	L	I	I	Y	S	I	N	F	K	E	F	F	Q	N	P	E	G	.	.	W	E	G	R	K	K	I	L	I	N	A	A	K	A	L	E	R	A	G	A	E	L	I	A
Template Known Secondary structure											S	S																			S	S	T	T												T					T		T	T		.	.																			T		S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	T	N	T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I	N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		F	A	A	N	T	P	H	L	V	F	D	D	V	Q	R	E	V	N	V	P	M	V	S	I	I	D	A	V	A	E	E	I	L	K	R	G	V	R	K	V	L	L	L	G	T	K	T	T	M	T	A	D	F	Y	I	K	T	L	E	E	K	.	G	L	E	V	V	V	P	N	D	E	E	K	E	E	L	N	R	I
Template Known Secondary structure			S	S	S	G	G	G	G	G									S	S		B														T	T								S	S	T	T	T	T	S										T	T	.	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	E	E	L	C	L	G	Q	F	T	E	A	S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T	E	I	G	L	L	V	P	E	E	R	S	V	L	P	V	F	D	T	A	A	I	H	A	E	D	A	V	A	F	M	L
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		I	F	E	E	L	A	F	G	N	.	L	K	N	K	E	W	I	V	R	L	I	E	K	Y	R	E	S	E	G	I	E	G	V	I	L	G	C	T	E	L	P	L	A	I	K	Q	G	D	V	S	V	E	V	F	D	S	A	E	I	H	M	R	K	L	I	E	L	A	S
Template Known Secondary structure					T	G	G	G	T		.		T	T															S			S						S	S	S	G	G	G	T			G	G	G	S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		158	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions