Job Description P03813 Confidence 36.74% Date Thu Jan 5 10:58:00 GMT 2012 Rank 172 Aligned Residues 84 % Identity 15% Template c2qvcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding PDBTitle: crystal structure of a periplasmic sugar abc transporter2 from thermotoga maritima Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C
Query Conservation
Alig confidence							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	G	V	I	.	.	.	.	G	K	S	V	H	P	Y	W	S	Q	V	E	Q	G	V	K	A	A	G	K	A	L	G	V	D	T	K	F	F	V	P	Q	K	E	D	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	Q	X	L	E	S	F	I	A	E	G	V	N	G	I	A	I	A
Template Known Secondary structure							.	.	.	.		S		S	S																		T									S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S
Template Predicted Secondary structure							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.															.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		83	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		T	N	T	M	H	K	.	.	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		P	S	D	P	T	A	V	I	P	T	I	K	K	A	L	E	X	G	I	P	V	V	T	L
Template Known Secondary structure			S	S	T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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