Return to main results Retrieve Phyre Job Id

Job DescriptionP03813
Confidence100.00%DateThu Jan 5 10:58:00 GMT 2012
Rank7Aligned Residues206
% Identity16%Templatec2gzmB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of the glutamate racemase from bacillus2 anthracis
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2..... ..10.........20.........30.........40. ........50.........60.........70.........
Predicted Secondary structure 
.











.














Query SS confidence 





.

































.





































Query Sequence  KTIGLL. GGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLH. SVDFHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGI
Query Conservation 
 



.




 

      
        
          .                      
      
   
 
 
Alig confidence 





.






.......



















.




.......

























Template Conservation   












.......
   
    
    

  
    


....... 

 
 
          
   
 
 
Template Sequence  RAIGVIDSGVGGLT. . . . . . . VAKELIRQLPKERIIYLGDTARCPYG. . . . . . . PRSREEVRQFTWEMTEHLLDLNIKML
Template Known Secondary structure  S
SSSTT.......
TTS

GGG


T.......TS
TT

S
Template Predicted Secondary structure 





.......












.......






Template SS confidence 















































































   5....10........ .20.........30.........40.... .....50.........60.........70
 
   80....... ..90.........100.........110.... .....120.........130.........140.........150.......
Predicted Secondary structure 



.



.












Query SS confidence 







.


























.










































Query Sequence  VLCTNTMH. KVADAIESRCTLPFLHIADATGRAITG. AGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKI
Query Conservation 







.     
     



 

         .     





  
  
  
   
    
     
        
Alig confidence 







.


























.


























.






.....


Template Conservation 







   

 

    



  

  
  
        





  

 
  
   
   .     
 .....   
Template Sequence  VIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAYEEALKSI. NNRVMVE. . . . . SLA
Template Known Secondary structure 


SS
S
SS

T.
TT
.....
Template Predicted Secondary structure 

















.




.....


Template SS confidence 















































































   71........80.........90.........100.........110.........120.........130.... .....140. ...
 
   158.160.........170 .........180.........190.........200........ .210.........220.......
Predicted Secondary structure 



.









....



Query SS confidence 












.





































. . . .


















Query Sequence  NQIIFEELCLGQF. TEASRAYCAQVIARLAEQGAQGVIFGCTEIGLLVPEER. . . . SVLPVFDTAAIHAEDAVAF
Query Conservation     
   
  
  .       
      
   
 
 






 


     ....    


    

   
  
Alig confidence 












.





































....


















Template Conservation     

  

 
          
   
  
     
 






 
 
   
       
 



    
      
Template Sequence  CPPFVELVESGNFESEMAYEVVRETLQPLKNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTI
Template Known Secondary structure 
TTTT
SSSSS

S
STTGGGG
TTS
Template Predicted Secondary structure 




















Template SS confidence 










































































   145....150.........160.........170.........180.........190.........200.........210.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions