Job Description P03813 Confidence 67.95% Date Thu Jan 5 10:58:00 GMT 2012 Rank 87 Aligned Residues 88 % Identity 16% Template c2fqxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:membrane lipoprotein tmpc; PDBTitle: pnra from treponema pallidum complexed with guanosine Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	V	G	F	I	V	G	M	E	L	G	M	M	P	L	F	E	A	G	F	E	A	G	V	K	A	V	D	P	D	I	Q	V	V	V	E	V	A	N	T	F	S	D	P	Q	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	A	A	K	L	Y	D	S	G	V	N	V	I	F	Q
Template Known Secondary structure									S			S	T	T	T																T	T									S		S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.		.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.
Predicted Secondary structure									.									.	.	.	.
Query SS confidence									.									.	.	.	.
Query Sequence		C	T	N	T	M	H	K	.	V	A	D	A	I	E	S	R	.	.	.	.	C	T	L	P	F	L	H	I
Query Conservation									.									.	.	.	.
Alig confidence									.									.	.	.	.
Template Conservation
Template Sequence		V	A	G	G	T	G	N	G	V	I	K	E	A	R	D	R	R	L	N	G	Q	D	V	W	V	I	G	V
Template Known Secondary structure				G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions