Return to main results Retrieve Phyre Job Id

Job DescriptionP03813
Confidence52.75%DateThu Jan 5 10:58:00 GMT 2012
Rank126Aligned Residues91
% Identity16%Templatec2axqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190......
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  MTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYCAQVIARLAEQGAQGVIFG
Query Conservation     





  
  
  
   
    
     
           
   
  
         
      
   
 
 



Alig confidence 








.







.
















































.....





.
Template Conservation   


 



.
  
    .  
       
 

 
                   
      
      ..... 



 .
Template Sequence  GKNVLLLGS. GFVAQPVI. DTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLAD. . . . . NDVVIS.
Template Known Secondary structure 


.STT.TSTTSSGGGT


TT
T.....SS.
Template Predicted Secondary structure 



.
.














.....

.
Template SS confidence 















































































   2.......10 ........ .20.........30.........40.........50.........60....... ..70...
 
   197. .200.........210.....
Predicted Secondary structure 

....





Query SS confidence 

. . . .
















Query Sequence  CT. . . . EIGLLVPEERSVLPVFD
Query Conservation 

....
 


         


Alig confidence 

....
















Template Conservation    
      
       
 
 

Template Sequence  LIPYTFHPNVVKSAIRTKTDVVT
Template Known Secondary structure 
S
GGGT
Template Predicted Secondary structure 










Template SS confidence 






















   74.....80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions