Job Description P03813 Confidence 68.78% Date Thu Jan 5 10:58:00 GMT 2012 Rank 85 Aligned Residues 91 % Identity 16% Template c1zq1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.															.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	T	I	G	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		L	P	E	V	T	I	I	G	T	G	G	T	I	A	S	R	I	D	Y	E	T	G	A	V	Y	P	A	F	T	A	.	.	.	E	E	L	A	K	A	L	P	E	I	F	E	V	A	N	V	K	P	K	L	L	F	N	I	F	S	E	.	.	.	.	.	.	.	.	D	X	K	P	K	H	W	V	K	I	A	H
Template Known Secondary structure										S	S									T	T	T	T									.	.	.								G	G	G	G	G	T	S												G	G	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C	T	N	T	.	.	.	.	.	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		E	V	A	K	A	L	N	S	G	D	Y	G	V	V	V	A	H	G	T	D	T	X	G	Y	T	A	A	A	L	S	F	X	L	R	N	L	G	K	P	V	V
Template Known Secondary structure										T		S								T	T	T												S	B	T			S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions