Job Description P03813 Confidence 87.01% Date Thu Jan 5 10:58:00 GMT 2012 Rank 47 Aligned Residues 192 % Identity 16% Template c1u9yD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii Resolution 2.65 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G	L	Q	R	A	G	A	E	G	I	V	L	C	T	N	T	M	H	K	V	A	D	A	I	E	S	R
Query Conservation
Alig confidence																																												.	.	.	.	.																								.	.	.	.
Template Conservation																																												.	.	.	.	.																								.	.	.	.
Template Sequence		A	I	V	E	T	I	L	L	C	D	A	L	R	D	E	G	V	K	K	I	T	L	V	A	P	Y	L	A	Y	A	R	Q	D	K	K	F	N	P	G	E	A	I	.	.	.	.	.	S	I	R	A	L	A	K	I	Y	S	N	I	V	D	K	L	I	T	I	N	P	H	E	.	.	.	.	T	H	I	K	D	F
Template Known Secondary structure															T	T	T									S	S		T	T		S		S	S		S	S	T	T				.	.	.	.	.														S						S		S		.	.	.	.	G	G	G	G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.																								.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.
		97	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure											.	.																										.
Query SS confidence											.	.																										.
Query Sequence		C	T	L	P	F	L	H	I	A	.	.	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	.	Q	D	F	Y	R	G	R	L	T	E	Q	F	S	I	N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	T	E	A
Query Conservation											.	.																										.
Alig confidence											.	.																										.																																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	T	I	P	F	I	Y	G	D	A	V	P	K	L	A	E	Y	V	K	D	K	L	N	D	P	I	V	L	A	P	D	K	G	A	L	E	F	A	K	T	A	S	K	I	L	N	A	E	Y	D	Y	L	E	I	A	P	K	T	L	D	A	K	D	R	D	V	F	I	V	D	D	I	I	S	T	G	.	.	.	.
Template Known Secondary structure			S	S																T	T	T		S	S						S	S	G	G	G												T						B				B	S	S				T	T											S	S	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	A	Y	C	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	C	T	E	I	G	L	L	V	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	S	V	L	P	V	F	D	T	A	A	I	H	A	E	D	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																									.
Template Sequence		.	.	G	T	M	A	T	A	V	K	L	L	K	E	Q	G	A	K	K	I	I	A	A	C	V	H	.	P	V	L	I	G	D	A	L	N	K	L	Y	S	A	G	V	E	E	V	V	G	T	D	T	Y	L	S	E	V	S	K	V	S	V	A	E	V	I	V	D	L	L
Template Known Secondary structure		.	.													T	T											.					T	T									T		S						T	T	S			T	T
Template Predicted Secondary structure		.	.																									.
Template SS confidence
				219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions