Return to main results Retrieve Phyre Job Id

Job DescriptionP23839
Confidence25.44%DateThu Jan 5 11:39:44 GMT 2012
Rank3Aligned Residues72
% Identity14%Templated1vcsa1
SCOP infoSTAT-like t-snare proteins t-snare proteins
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.........170.........180.........190..
Predicted Secondary structure 


Query SS confidence 







































































Query Sequence  QDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVTAEVVKVRSHMPEILQWQRERLVAKLEDA
Query Conservation     
     
   
  

  
   
  

  
  

  

  
      
           



  

 
 
Alig confidence 







































































Template Conservation 
 

  
  
 


  

  
    

 

  
  

  



 


 





   
 
 
     


 
Template Sequence  EGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSY
Template Known Secondary structure 

SGGGS
TTTTTS
TTT
Template Predicted Secondary structure 






Template SS confidence 







































































   8.10.........20.........30.........40.........50.........60.........70.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions