Return to main results Retrieve Phyre Job Id

Job DescriptionP23839
Confidence35.92%DateThu Jan 5 11:39:44 GMT 2012
Rank1Aligned Residues79
% Identity22%Templated1nt2b_
SCOP infoNop domain Nop domain Nop domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260. .....
Predicted Secondary structure 















......
Query SS confidence 




































































. . . . . .




Query Sequence  QVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSI. . . . . . NAEVT
Query Conservation      

 

 




 


 

 


 

 


  
   
     







 


 









 ......
  

Alig confidence 








































..............













......




Template Conservation      

   
       

 


      
  


 
  

.............. 


 

    
 



   



 
Template Sequence  ALGKDYYRILRKTALAVSEKMVEKELRREDRYVVALVKALE. . . . . . . . . . . . . . EIDESINMLNEKLEDIRAVKESEIT
Template Known Secondary structure  TS
STT..............TTTTTT


TT
Template Predicted Secondary structure 




..............
Template SS confidence 















































































   56...60.........70.........80.........90...... ...100.........110.........120.
 
   267..270.........280.....
Predicted Secondary structure 
Query SS confidence 


















Query Sequence  NSAIELKVLIEQMREQIQN
Query Conservation    


 
 










Alig confidence 


















Template Conservation     
  
  
 
 
  
  
Template Sequence  EKFEKKIRELRELRRDVER
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


















   122.......130.........140
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions