Return to main results Retrieve Phyre Job Id

Job DescriptionP23839
Confidence5.78%DateThu Jan 5 11:39:44 GMT 2012
Rank68Aligned Residues51
% Identity14%Templated1ip9a_
SCOP infobeta-Grasp (ubiquitin-like) CAD & PB1 domains PB1 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80........
Predicted Secondary structure 

















Query SS confidence 






















































Query Sequence  TYFRLPEQFRSLEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQL
Query Conservation 
  


  
   
  

  
   
 



 
 
             

  
    
Alig confidence 












..











..

























Template Conservation      
    
  
..
  

  

   ..   


 




 


 

 

  

Template Sequence  FALMLKGDTTYKE. . LRSKIAPRIDTD. . NFKLQTKLFDGSGEEIKTDSQVSNII
Template Known Secondary structure 
S


..TSS..


SSS

S


S
Template Predicted Secondary structure 




..



..






Template SS confidence 






















































   24.....30...... ...40........ .50.........60.........70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions