Job Description P23839 Confidence 13.51% Date Thu Jan 5 11:39:44 GMT 2012 Rank 13 Aligned Residues 69 % Identity 13% Template c3onjA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain Resolution 1.92 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		D	A	I	A	A	E	I	L	A	A	L	D	G	T	L	D	D	F	I	V	A	R	E	T	E	G	Q	A	L	K	A	L	I	E	Q	R	L	E	G	V	T	A	E	V	V	K	V	R	S	H	M	P	E	I	.	.	L	Q	W	Q	R	E	R	L	V	A	K	L	E	D	A
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		E	S	D	F	K	T	T	L	E	Q	A	K	A	S	L	A	E	A	P	S	Q	P	L	S	Q	R	N	T	T	L	K	H	V	E	Q	Q	Q	D	E	L	F	D	L	L	D	Q	M	D	V	E	V	N	N	S	I	G	D	A	S	E	R	A	T	Y	K	A	K	L	R	E	W
Template Known Secondary structure																			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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