Job Description P23839 Confidence 11.71% Date Thu Jan 5 11:39:44 GMT 2012 Rank 17 Aligned Residues 45 % Identity 9% Template c3n1bA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 54; PDBTitle: c-terminal domain of vps54 subunit of the garp complex Resolution 2.40 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200			.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																.	.				.	.
Query SS confidence																																.	.				.	.
Query Sequence		V	K	V	R	S	H	M	P	E	I	L	Q	W	Q	R	E	R	L	V	A	K	L	E	D	A	Q	V	Q	L	E	.	.	N	N	R	.	.	L	E	Q	E	L	V	L	L	A	Q	R	I
Query Conservation																																.	.				.	.
Alig confidence																																.	.				.	.
Template Conservation
Template Sequence		E	Q	T	Q	X	L	F	L	R	I	N	A	S	Y	K	L	H	L	K	K	Q	L	S	H	L	N	V	I	N	D	G	G	P	Q	N	G	L	V	T	A	D	V	A	F	Y	T	G	N	L
Template Known Secondary structure																										T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		908	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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