Job Description P23839 Confidence 24.48% Date Thu Jan 5 11:39:44 GMT 2012 Rank 5 Aligned Residues 105 % Identity 12% Template c2xzmI_ PDB info PDB header:ribosome Chain: I: PDB Molecule:rps16e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		T	A	Y	A	R	R	E	I	K	G	E	W	G	S	A	T	W	E	M	R	S	V	N	Q	R	Y	L	E	T	Y	F	R	L	P	E	Q	F	R	S	L	E	P	V	V	R	E	R	I	R	S	R	L	T	R	.	G	K	V	E	C	T	L	R	Y	E	P	D	V	S	A	Q	G	E	L	I	L	N	E	K	L
Query Conservation																																																								.
Alig confidence																		.	.	.	.	.											.	.					.	.																.
Template Conservation																		.	.	.	.	.											.	.					.	.
Template Sequence		N	A	V	A	V	A	S	V	R	P	G	K	G	L	L	K	.	.	.	.	.	V	N	G	S	P	I	D	M	I	N	.	.	P	Q	I	L	.	.	Q	A	K	I	Y	E	P	I	L	L	L	G	Q	Q	K	F	A	N	L	D	I	R	I	R	V	R	G	S	G	Y	T	S	Q	V	Y	A	I	R	Q	A	L
Template Known Secondary structure		T										S	S					.	.	.	.	.		S	S	S	B	G	G	G		S	.	.	S	T	T	T	.	.																												S	S
Template Predicted Secondary structure																		.	.	.	.	.											.	.					.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.			.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	L	V	T	A	A	N	W	V	K	M	Q	S	D	E	G	E	I	N	P	V	D	I	L	R	W	P	G	V	M	A	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	G	I	V	A	Y	H	A	K	Y	V	D	E	N	S	K	R	E	I	K	E	Q	L	M	Q	Y	D	R	S	L	L	V	A	D
Template Known Secondary structure													S																	S	T	T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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