Job Description P76217 Confidence 15.08% Date Thu Jan 5 12:20:42 GMT 2012 Rank 84 Aligned Residues 112 % Identity 13% Template c3v4gA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6 Resolution 1.60 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		R	H	A	V	V	E	R	F	A	A	L	L	E	S	N	K	.	.	.	.	A	E	L	T	A	I	I	A	R	E	T	G	K	P	R	W	E	A	A	T	E	V	T	A	M	I	N	K	I	A	I	S	I	K	A	Y	H	V	R	T	G	E	Q	R	S	E	M	P	D	G	A	A	S	L	R	H	R	P	H	G
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		Q	D	N	L	V	R	A	F	K	A	L	L	K	E	E	R	F	G	S	Q	G	E	I	V	E	A	L	K	Q	E	G	F	E	N	I	N	Q	S	K	V	.	.	.	.	.	.	.	.	.	.	.	.	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	T	.	.	.
Template Known Secondary structure																T				S											T	T		T	T							.	.	.	.	.	.	.	.	.	.	.	.							T	T							T	T	S									.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	V	F	G	P	Y	N	F	P	G	H	L	P	N	G	H	I	V	P	A	L	L	A	G	N	T	I	I	F	K	P	S	E	L	T	P	W	S	G	E	A	V	M	R	L	W	Q	Q	A	G	L	P	P	G	V	L	N	L	V	Q	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	S	S	S	L	R	E	L	V	L	D	V	D	H	N	Q	A	L	V	V	I	H	T	G	.	.	.	P	G	A	A	Q	L	I	A	R	M	L	D	S	L	G	K	S	E	G	I	L	G	V	V	A	G	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T			T	G	G	G								S	S							S	.	.	.	T	T														G	G	G	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
												78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions