Job Description P76217 Confidence 100.00% Date Thu Jan 5 12:20:42 GMT 2012 Rank 38 Aligned Residues 462 % Identity 27% Template c3v4cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde dehydrogenase (nadp+); PDBTitle: crystal structure of a semialdehyde dehydrogenase from sinorhizobium2 meliloti 1021 Resolution 1.91 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	W	I	N	G	D	W	I	T	G	Q	G	A	S	R	V	K	R	N	P	V	S	G	E	V	L	W	Q	G	N	D	A	D	A	A	Q	V	E	Q	A	C	R	A	A	R	A	A	F	P	R	W	A	R	L	S	F	A	E	R	H	A	V	V	E	R	F	A	A	L	L	E	S	N	K	A	E	L	T	A
Query Conservation
Alig confidence															.	.										.
Template Conservation															.	.										.
Template Sequence		K	H	L	V	A	G	E	W	L	D	G	A	G	.	.	T	F	A	S	A	P	A	H	G	.	P	A	H	D	F	A	V	G	T	V	E	L	V	N	R	A	C	E	A	A	E	E	A	F	W	T	Y	G	Y	S	S	R	K	E	R	A	A	F	L	R	A	I	A	D	E	I	E	A	R	A	E	A	I	T	E
Template Known Secondary structure						T	T						S	S	.	.							S	S	S	.																												T	T																				T
Template Predicted Secondary structure															.	.										.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		I	I	A	R	E	T	G	K	P	R	W	E	A	A	T	E	V	T	A	M	I	N	K	I	A	I	S	I	K	A	Y	H	V	R	T	G	E	Q	R	.	.	.	.	.	.	.	.	.	S	E	M	P	D	G	A	A	S	L	R	H	R	P	H	G	V	L	A	V	F	G	P	Y	N	F	P	G	.	.	H	L
Query Conservation																																									.	.	.	.	.	.	.	.	.																													.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		I	G	S	Q	E	T	G	L	P	E	A	R	L	N	G	E	R	G	R	T	T	G	Q	L	R	L	F	A	D	H	I	E	K	G	D	Y	L	D	R	R	V	D	A	A	X	P	E	R	Q	P	A	P	R	Q	E	I	R	L	V	Q	R	P	V	G	P	V	A	V	F	G	A	S	N	F	P	L	A	F	S	T
Template Known Secondary structure																																				G	G	G								B	T	T		S	S	S		B											S								S	S		T	T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.													.
Query SS confidence																																							.	.	.	.													.
Query Sequence		P	N	G	H	I	V	P	A	L	L	A	G	N	T	I	I	F	K	P	S	E	L	T	P	W	S	G	E	A	V	M	R	L	W	Q	Q	A	.	.	.	.	G	L	P	P	G	V	L	N	L	V	Q	G	.	G	R	E	T	G	Q	A	L	S	A	L	E	D	L	D	G	L	L	F	T	G	S	A	N	T	G
Query Conservation																																							.	.	.	.													.
Alig confidence																																							.	.	.	.													.
Template Conservation
Template Sequence		A	G	G	D	T	A	A	A	L	A	A	G	C	P	V	V	V	K	G	H	S	A	H	P	G	T	G	E	I	V	A	E	A	V	D	A	A	I	R	K	T	G	V	H	P	G	V	F	S	L	I	Q	G	G	S	R	D	V	G	H	A	L	V	Q	H	P	H	I	K	A	V	G	F	T	G	S	L	A	G	G
Template Known Secondary structure		T	S										T									T	T	S																			T			G	G	G																			T	T								S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure														.																									.	.	.																					.
Query SS confidence														.																									.	.	.																					.
Query Sequence		Y	Q	L	H	R	Q	L	S	G	Q	P	E	.	K	I	L	A	L	E	M	G	G	N	N	P	L	I	I	D	E	V	A	D	I	D	A	A	.	.	.	V	H	L	T	I	Q	S	A	F	V	T	A	G	Q	R	C	T	C	A	R	.	R	L	L	L	K	S	G	A	Q	G	D	A	F	L	A	R	L	V	A
Query Conservation														.																									.	.	.																					.
Alig confidence														.																									.	.	.																					.										.
Template Conservation																																																																								.
Template Sequence		R	A	L	F	D	L	C	A	A	R	P	E	P	I	P	F	F	G	E	L	G	S	V	N	P	X	F	L	L	P	E	A	L	K	A	R	A	E	T	L	G	Q	G	W	A	G	S	L	T	X	G	A	G	Q	F	C	T	N	P	G	I	A	V	V	I	E	G	A	D	A	.	D	R	F	T	T	A	A	V	E
Template Known Secondary structure											S	S	S																																						G	G	G	G			T	T									S	S				.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		V	S	Q	R	L	T	P	G	N	W	D	D	E	P	Q	P	F	I	G	G	L	I	S	E	Q	A	A	Q	Q	V	V	T	A	W	Q	Q	L	E	A	M	G	G	R	P	L	L	A	P	R	L	L	Q	A	G	T	S	L	L	T	P	G	I	I	E	M	T	G	V	A	.	.	.	G	V	P	D	E	E	V	F
Query Conservation																																																																							.	.	.
Alig confidence							.	.	.	.	.	.	.																								.	.	.													.	.																		.	.	.
Template Conservation							.	.	.	.	.	.	.																								.	.	.													.	.
Template Sequence		A	L	A	K	V	.	.	.	.	.	.	.	A	P	Q	T	X	L	T	D	G	I	A	K	A	Y	R	D	G	Q	A	R	F	A	T	.	.	.	R	N	A	V	K	P	L	L	A	T	E	S	.	.	S	G	R	D	A	S	P	N	L	F	E	T	T	G	A	Q	F	L	A	D	H	A	L	G	E	E	V	F
Template Known Secondary structure				T	T		.	.	.	.	.	.	.						S																	T	.	.	.		T	T	S									.	.		T	T																		G	G	G	G	S			S
Template Predicted Secondary structure							.	.	.	.	.	.	.																								.	.	.													.	.
Template SS confidence
		324	.	.	.	.								.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																																	.	.																.	.															.	.	.
Query SS confidence																																	.	.																.	.															.	.	.
Query Sequence		G	P	L	L	R	V	W	R	Y	D	T	F	D	E	A	I	R	M	A	N	N	T	R	F	G	L	S	C	G	L	V	.	.	S	P	E	R	E	K	F	D	Q	L	L	L	E	A	R	.	.	A	G	I	V	N	W	N	K	P	L	T	G	A	A	.	.	.	S	T	A	P	F	G	G	I	G	A	S	G	N
Query Conservation																																	.	.																.	.															.	.	.
Alig confidence																																	.	.																.	.															.	.	.
Template Conservation
Template Sequence		G	P	L	G	L	V	V	R	V	G	S	P	A	E	X	E	E	L	A	R	G	F	Q	G	Q	L	T	A	T	I	H	X	D	A	G	D	L	E	T	A	R	R	L	R	P	V	L	E	R	K	A	G	R	V	L	V	N	G	F	P	T	G	V	E	V	V	D	S	X	V	H	G	G	P	Y	P	A	S	T	N
Template Known Secondary structure		S	S								S	S															S								G	G	G																S					S	S		T	T					S	T	T						S	T	T	S	B	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		451	.			.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		H	R	.	.	P	S	A	W	Y	A	A	D	Y	C	A	W	P	M	A	S	L	E	S	D	S	L	T	L	P	A	T
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		F	G	A	T	S	V	G	T	X	S	I	R	R	F	L	R	P	V	A	Y	Q	N	X	P	E	D	L	L	P	E	D
Template Known Secondary structure		T	T			S	S	S	G	G	G	G	G	G	G								S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.