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Job DescriptionP76217
Confidence100.00%DateThu Jan 5 12:20:42 GMT 2012
Rank40Aligned Residues426
% Identity24%Templatec3lnsD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:benzaldehyde dehydrogenase; PDBTitle: benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with2 bound nadp+ and benzoate adduct
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90..... ....100.........110.
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Query Sequence  DADAAQVEQACRAARAAFPRWARLSFAERHAVVERFAALLESNKAELTAIIARETGKPRWEAA. TEVTAMINKIAISIKA
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Template Conservation    
   
  
   
  
   
       
   
      
      
      
 

    
   

      
      
Template Sequence  YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH
Template Known Secondary structure 


TTTT
STT


T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   112...... .120.........130.........140.........150.........160.........170.........180.......
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Query Sequence  YHVRTGE. . . . QRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGEAVMRLWQQA
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Template Sequence  LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA
Template Known Secondary structure  TS



GGG
S




SSSTTTT


TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  GLPPGVLNLVQGGRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQ
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Template Sequence  FAPEY. VAVIQGGRDENSHLLSLP. FDFIFFTGSPNVGKVVMQAAAKH. LTPVVLELGGKCPLIVLPDADLDQTVNQLMF
Template Known Secondary structure 

TTT.



TS
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TT.T






TT

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   163.... ..170.........180..... ....190.........200........ .210.........220.........230.........
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  SAFVTAGQRCTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAWQQLEAMGGRPLLA
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Template Sequence  GKFINSGQ. TIAPDYLYVHYSVKDALLERLVERVKTEL. . . . . . . PEINSTGKLVTERQVQRLVSLLEAT. . . QGQVLVG
Template Known Secondary structure  GGGG
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GGG
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STTTT


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S
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   240....... ..250.........260.........270...... ...280.........290.........300. .......
 
   348.350.........360.........370.........380.........390........ .400.........410.........420......
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Query Sequence  PRLLQAGTSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDTFDEAIRMANN. TRFGLSCGLVSPEREKFDQLLLEARAGI
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Template Sequence  SQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGD
Template Known Secondary structure 

GGGT

S

TTSGGGSS


SSS
S
S
S
S
TS

S
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   310.........320.........330.........340.........350.........360.........370.........380.........
 
   427..430...... ...440.........450.........460.........470..
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Query Sequence  VNWNKPLTGA. ASTAPFGGIGASGNHRPSAWYAADYCAWPMASLESD
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Template Sequence  AQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIVP
Template Known Secondary structure  S

SGGGG
TTS
B


GGG

BST

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   390.........400.........410.........420.........430......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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