Job Description P76217 Confidence 100.00% Date Thu Jan 5 12:20:42 GMT 2012 Rank 29 Aligned Residues 466 % Identity 24% Template c3k2wD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:betaine-aldehyde dehydrogenase; PDBTitle: crystal structure of betaine-aldehyde dehydrogenase from2 pseudoalteromonas atlantica t6c Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		W	I	N	G	D	W	I	T	G	.	Q	G	A	S	R	V	K	R	N	P	V	S	G	E	V	L	W	Q	G	N	D	A	D	A	A	Q	V	E	Q	A	C	R	A	A	R	A	A	F	P	R	W	A	R	L	S	F	A	E	R	H	A	V	V	E	R	F	A	A	L	L	E	S	N	K	A	E	L	T	A	I
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		F	I	G	G	Q	Y	V	P	S	N	E	S	D	T	I	D	I	L	S	P	S	T	G	K	V	I	G	E	I	P	A	G	C	K	A	D	A	E	N	A	L	E	V	A	Q	A	A	Q	K	A	W	A	K	L	T	A	R	T	R	Q	N	M	L	R	T	F	A	N	K	I	R	E	N	K	H	I	L	A	P	M
Template Known Secondary structure				T	T						S	S									T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		I	A	R	E	T	G	K	P	R	W	E	A	A	T	E	V	T	A	M	I	N	K	I	A	I	S	I	K	A	Y	H	V	R	T	G	E	.	Q	R	S	E	M	P	D	G	A	A	S	L	R	H	R	P	H	G	V	L	A	V	F	G	P	Y	N	F	P	G	H	L	P	N	G	H	I	V	P	A	L	L	A
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		L	V	A	E	Q	G	K	L	L	S	V	A	E	M	E	V	D	V	T	A	T	F	I	D	Y	G	C	D	N	A	L	T	I	E	G	D	I	L	P	S	D	N	Q	D	E	K	I	Y	I	H	K	V	P	R	G	V	V	V	G	I	T	A	W	N	F	P	L	A	L	A	G	R	K	I	G	P	A	L	I	T
Template Known Secondary structure																														T	T	T	T									S	S	T	T											S								S	S	S															T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	N	T	I	I	F	K	P	S	E	L	T	P	W	S	G	E	A	V	M	R	L	W	Q	Q	A	G	L	P	P	G	V	L	N	L	V	Q	G	G	.	R	E	T	G	Q	A	L	S	A	L	E	D	L	D	G	L	L	F	T	G	S	A	N	T	G	Y	Q	L	H	R	Q	L	S	G	Q	P	E	K	I	L
Query Conservation																																									.
Alig confidence																																									.																																				.
Template Conservation																																																																													.
Template Sequence		G	N	T	M	V	L	K	P	T	Q	E	T	P	L	A	T	T	E	L	G	R	I	A	K	E	A	G	L	P	D	G	V	L	N	V	I	N	G	T	G	S	V	V	G	Q	T	L	C	E	S	P	I	T	K	M	I	T	M	T	G	S	T	V	A	G	K	Q	I	Y	K	T	S	A	E	Y	.	M	T	P	V
Template Known Secondary structure		T									S	S	S														T	T			T	T	T						S		T	T	T									T	T								S													T	T	T	.	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	M	G	G	N	N	P	L	I	I	D	E	V	A	D	I	D	A	A	V	H	L	T	I	Q	S	A	F	V	T	A	G	Q	R	C	T	C	A	R	R	L	L	L	K	S	G	A	Q	G	D	A	F	L	A	R	L	V	A	V	S	Q	R	L	T	P	G	N	W	D	D	E	P	Q	P	F	I	G	G
Query Conservation
Alig confidence																																																						.																				.
Template Conservation																																																						.																				.
Template Sequence		M	L	E	L	G	G	K	A	P	M	V	V	M	D	D	A	D	L	D	K	A	A	E	D	A	L	W	G	R	F	A	N	C	G	Q	V	C	T	C	V	E	R	L	Y	V	H	A	S	V	Y	D	E	.	F	M	A	K	F	L	P	L	V	K	G	L	K	V	G	D	P	M	D	.	A	D	S	Q	M	G	P
Template Known Secondary structure															T	T	S															G	G	G	G		S	T	T	S								G	G	G				.											T			B			T	T	S	.	T	T		S	B
Template Predicted Secondary structure																																																						.																				.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.										.
Query SS confidence																																				.	.	.	.										.
Query Sequence		L	I	S	E	Q	A	A	Q	Q	V	V	T	A	W	Q	Q	L	E	A	M	G	G	R	P	L	L	A	P	R	L	L	Q	A	G	.	.	.	.	T	S	L	L	T	P	G	I	I	.	E	M	T	G	V	A	G	V	P	D	E	E	V	F	G	P	L	L	R	V	W	R	Y	D	T	F	D	E	A	I	R	M
Query Conservation																																				.	.	.	.										.
Alig confidence																																				.	.	.	.										.
Template Conservation
Template Sequence		K	C	N	Q	R	E	I	D	N	I	D	H	I	V	H	E	A	I	K	Q	G	A	T	V	A	T	G	G	K	T	A	T	V	E	G	F	E	G	G	C	W	Y	E	P	T	V	L	V	D	V	K	Q	D	N	I	V	V	H	E	E	T	F	G	P	I	L	P	I	V	K	V	S	S	M	E	Q	A	I	E	F
Template Known Secondary structure			S																			T								S	B				T	T			S	S			B							S			T	T	S	G	G	G	T	S				S	S								S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	N	T	R	F	G	L	S	C	G	L	V	S	P	E	R	E	K	F	D	Q	L	L	L	E	A	R	A	G	I	V	N	W	N	K	P	L	T	G	A	A	S	T	A	P	F	G	G	I	G	A	S	G	N	H	R	P	S	A	W	Y	A	A	D	Y	C	A	W	P	M	A	S	L	E	S	D	S
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		C	N	D	S	I	Y	G	L	S	A	Y	V	H	T	Q	S	F	A	N	I	N	Q	A	I	S	D	L	E	V	G	E	V	Y	I	N	R	G	M	G	E	Q	.	H	Q	G	F	H	N	G	W	K	Q	S	G	F	G	G	E	D	G	K	F	G	L	E	Q	Y	L	E	K	K	T	V	Y	I	N	E	A
Template Known Secondary structure				S	S	S			S																					S	S					S			S				.	T	T	S		B					T	T			S		B	S							T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.