Job Description P76217 Confidence 100.00% Date Thu Jan 5 12:20:42 GMT 2012 Rank 2 Aligned Residues 474 % Identity 27% Template c2jg7G_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity Resolution 2.83 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	W	I	N	G	D	W	I	T	G	Q	G	A	S	R	V	K	R	N	P	V	S	G	E	V	L	W	Q	G	N	D	A	D	A	A	Q	V	E	Q	A	C	R	A	A	R	A	A	F	P	R	W	A	R	L	S	F	A	E	R	H	A	V	V	E	R	F	A	A	L	L	E	S	N	K	A	E	L	T	A
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		P	G	V	Y	N	G	S	W	G	G	.	S	G	E	V	I	T	S	Y	C	P	A	N	N	E	P	I	A	R	V	T	Q	A	T	L	A	E	Y	E	E	T	V	Q	K	T	R	E	A	W	K	M	W	A	D	I	P	A	P	K	R	G	E	I	V	R	Q	I	G	D	A	L	R	K	K	I	K	V	L	G	S
Template Known Secondary structure						S	S	S				.		S								T	T	T	T																													T	T	S																			T
Template Predicted Secondary structure												.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		I	I	A	R	E	T	G	K	P	R	W	E	A	A	T	E	V	T	A	M	I	N	K	I	A	I	S	I	K	A	Y	H	V	R	T	G	E	.	Q	R	S	E	M	P	D	G	A	A	S	L	R	H	R	P	H	G	V	L	A	V	F	G	P	Y	N	F	P	G	H	L	P	N	G	H	I	V	P	A	L	L
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		L	V	S	L	E	M	G	K	I	Y	V	E	G	V	G	E	V	Q	E	Y	V	D	V	C	D	Y	A	V	G	L	S	R	M	I	G	G	P	V	L	P	S	E	R	P	G	H	A	L	I	E	Q	W	N	P	V	G	L	V	G	I	I	T	A	F	N	F	P	V	A	V	Y	G	W	N	N	A	I	A	L	T
Template Known Secondary structure																																T	T	T									S	S	T	T											S								S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		A	G	N	T	I	I	F	K	P	S	E	L	T	P	W	S	G	E	A	V	M	R	L	W	Q	Q	A	.	.	.	.	G	L	P	P	G	V	L	N	L	V	Q	G	G	R	E	T	G	Q	A	L	S	A	L	E	D	L	D	G	L	L	F	T	G	S	A	N	T	G	Y	Q	L	H	R	Q	L	S	G	Q	P
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																																																	.
Template Conservation																																																																																	.
Template Sequence		C	G	N	V	C	L	W	K	G	A	P	T	T	P	L	T	S	V	A	V	T	K	I	V	A	E	V	L	E	Q	N	N	L	P	G	A	I	C	S	M	T	C	G	G	A	D	I	G	T	A	M	A	K	D	E	R	V	D	L	L	S	F	T	G	S	T	H	V	G	K	M	V	A	M	M	V	Q	E	R	.
Template Known Secondary structure		T	T									T	T																			T	T			G	G	G							S											T	T		S						S															T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	L	A	L	E	M	G	G	N	N	P	L	I	I	D	E	V	A	D	I	D	A	A	V	H	L	T	I	Q	S	A	F	V	T	A	G	Q	R	C	T	C	A	R	R	L	L	L	K	S	G	A	Q	G	D	A	F	L	A	R	L	V	A	V	S	Q	R	L	T	P	G	N	W	D	D	E	P	Q	P
Query Conservation
Alig confidence																																																								.																						.
Template Conservation																																																								.																						.
Template Sequence		F	G	R	K	L	L	E	L	G	G	N	N	A	I	I	V	F	E	D	A	D	L	N	L	V	V	P	S	A	V	F	A	S	V	G	T	A	G	Q	R	C	T	T	T	R	R	L	M	L	H	E	S	V	H	.	D	A	V	V	E	R	I	A	K	A	Y	K	Q	V	R	I	G	D	P	W	D	.	P	S	T
Template Known Secondary structure		T																	T	T	S															G	G	G	G		S	T	T									T	T	T		.												T	T			B			T	T	S	.	T	T
Template Predicted Secondary structure																																																								.																						.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		F	I	G	G	L	I	S	E	Q	A	A	Q	Q	V	V	T	A	W	Q	Q	L	E	A	M	G	G	R	P	L	L	A	P	R	L	L	Q	A	G	T	S	L	L	T	P	G	I	I	.	E	M	T	G	V	A	G	V	P	D	E	E	V	F	G	P	L	L	R	V	W	R	Y	D	T	F	D	E	A	I	R	M
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		L	Y	G	P	L	H	T	K	Q	A	V	D	Q	Y	L	A	A	I	E	Q	A	K	Q	Q	G	G	T	L	V	C	G	G	K	V	M	D	R	P	G	N	Y	V	E	P	T	I	I	T	G	L	A	H	D	A	P	I	V	H	T	E	T	F	V	P	I	L	Y	V	L	K	F	K	T	E	E	E	A	F	A	W
Template Known Secondary structure		S	B				S	S																	T	T								S	B		S	S	S	S	S		B										T	T						S				S	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		A	N	N	T	R	F	G	L	S	C	G	L	V	S	P	E	R	E	K	F	D	Q	L	.	.	L	L	E	A	R	A	G	I	V	N	W	N	K	P	L	T	G	A	A	S	T	A	P	F	G	G	I	G	A	S	G	N	H	R	P	S	A	W	Y	A	A	D	Y	C	A	W	P	M	A	S	L	E	S	D	S
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		N	N	E	V	Q	Q	G	L	S	S	S	I	F	T	K	D	L	G	R	V	F	R	W	L	G	P	K	G	S	D	C	G	I	V	N	V	N	I	P	T	S	G	A	E	I	G	G	A	F	G	G	E	K	H	T	G	G	G	R	E	S	G	S	D	S	W	K	Q	Y	M	R	R	S	T	C	T	I	N	Y	S
Template Known Secondary structure					S	S			S																	S	T	T	S			S	S					S	S		T	T				T	T	S					S	G	G	G		S					S	T	T	G	G	G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		474	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	P	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	L	P	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.