Job Description P76217 Confidence 100.00% Date Thu Jan 5 12:20:42 GMT 2012 Rank 7 Aligned Residues 473 % Identity 29% Template c2d4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:5-carboxymethyl-2-hydroxymuconate semialdehyde PDBTitle: crystal structure of the hpcc from thermus thermophilus hb8 Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		M	T	L	W	I	N	G	D	W	I	T	G	.	Q	G	A	S	R	V	K	R	N	P	V	S	G	E	V	L	W	Q	G	N	D	A	D	A	A	Q	V	E	Q	A	C	R	A	A	R	A	A	F	P	R	W	A	R	L	S	F	A	E	R	H	A	V	V	E	R	F	A	A	L	L	E	S	N	K	A	E	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		A	L	H	F	I	A	G	E	F	V	P	S	E	S	G	E	T	F	P	S	L	D	P	A	T	N	E	V	L	G	V	A	A	R	G	G	E	R	E	V	D	R	A	A	K	A	A	H	E	A	F	Q	R	W	S	R	T	K	A	K	E	R	K	R	Y	L	L	R	I	A	E	L	I	E	K	H	A	D	E	L
Template Known Secondary structure		B					T	T						T	T									T	T	T	T																															S																			T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		T	A	I	I	A	R	E	T	G	K	P	R	W	E	A	A	T	E	V	T	A	M	I	N	K	I	A	I	S	I	K	A	Y	H	V	.	R	T	G	E	Q	R	S	E	M	P	D	G	A	A	S	L	R	H	R	P	H	G	V	L	A	V	F	G	P	Y	N	F	P	G	H	L	P	N	G	H	I	V	P	A
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		A	V	M	E	C	L	D	A	G	Q	V	L	R	I	V	R	A	Q	V	A	R	A	A	E	N	F	A	F	Y	A	E	Y	A	E	H	A	M	E	D	R	T	F	P	V	D	R	D	W	L	Y	Y	T	V	R	V	P	A	G	P	V	G	I	I	T	P	W	N	A	P	L	M	L	S	T	W	R	I	A	P	A
Template Known Secondary structure																																T	T	G	G	G	T	T								T	T	T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	L	A	G	N	T	I	I	F	K	P	S	E	L	T	P	W	S	G	E	A	V	M	R	L	W	Q	Q	A	G	L	P	P	G	V	L	N	L	V	Q	G	G	.	R	E	T	G	Q	A	L	S	A	L	E	D	L	D	G	L	L	F	T	G	S	A	N	T	G	Y	Q	L	H	R	Q	L	S	G	Q	P	E
Query Conservation																																												.
Alig confidence																																												.																																				.
Template Conservation																																																																																.
Template Sequence		L	A	F	G	N	T	V	V	L	K	P	A	E	W	S	P	F	T	A	T	K	L	A	E	I	L	K	E	A	D	L	P	P	G	V	F	N	L	V	Q	G	F	G	E	E	A	G	A	A	L	V	A	H	P	L	V	P	L	L	T	L	T	G	E	T	E	T	G	K	I	V	M	R	N	A	A	D	H	.	L
Template Known Secondary structure				T	T									T	T	S														T	T			T	T	S								T	T	T									T	T								S													G	G	G	.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	A	L	E	M	G	G	N	N	P	L	I	I	D	E	V	A	D	I	D	A	A	V	H	L	T	I	Q	S	A	F	V	T	A	G	Q	R	C	T	C	A	R	R	L	L	L	K	S	G	A	Q	G	D	A	F	L	A	R	L	V	A	V	S	Q	R	L	T	P	G	N	W	D	D	E	P	Q	P	F
Query Conservation
Alig confidence																																																									.																				.
Template Conservation																																																									.																				.
Template Sequence		K	R	L	S	P	E	L	G	G	K	S	P	A	L	V	F	A	D	A	D	L	E	R	A	L	D	A	V	V	F	Q	I	F	S	F	N	G	E	R	C	T	A	S	S	R	L	L	V	E	E	K	I	F	E	D	.	F	V	G	K	V	V	E	R	A	R	A	I	R	V	G	H	P	L	D	.	P	E	T	E
Template Known Secondary structure																		T	T	S															G	G	G	G		S	T	T															.											T			B			T	T	S	.	T	T		S
Template Predicted Secondary structure																																																									.																				.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.									.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		I	G	G	L	I	S	E	Q	A	A	Q	Q	V	V	T	A	W	Q	Q	L	E	A	M	G	G	R	P	L	L	A	P	R	L	L	Q	A	G	.	.	.	.	.	.	.	.	T	S	L	L	T	P	G	I	I	E	M	T	G	V	A	G	V	P	D	E	E	V	F	G	P	L	L	R	V	W	R	Y	D	T	F
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	P	L	I	H	P	E	H	L	Q	R	V	L	G	Y	V	E	A	G	K	R	E	G	A	R	L	L	V	G	G	E	R	A	K	T	S	F	R	G	E	D	L	S	R	G	N	Y	L	L	P	T	V	F	V	G	E	N	H	M	K	I	A	Q	E	E	I	F	G	P	V	L	V	A	I	P	F	K	D	E
Template Known Secondary structure		B				S																		T	T								S	B			B		T	T	S		B		T	T	T	T		B									T	T	S					S				S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		D	E	A	I	R	M	A	N	N	T	R	F	G	L	S	C	G	L	V	S	P	E	R	E	K	F	D	Q	L	L	L	E	A	R	A	G	I	V	N	W	N	K	P	L	T	G	A	A	S	T	A	P	F	G	G	I	G	A	S	G	N	H	R	P	S	A	W	Y	A	A	D	Y	C	A	W	P	M	A	S	.
Query Conservation																																																																																	.
Alig confidence																																																	.																																.
Template Conservation																																																	.
Template Sequence		E	E	A	L	R	K	A	N	D	T	K	Y	G	L	A	A	Y	V	F	T	R	D	L	E	R	A	H	R	L	A	L	E	L	E	A	G	M	V	Y	L	N	S	H	N	V	R	H	.	L	P	T	P	F	G	G	V	K	G	S	G	D	R	R	E	G	G	T	Y	A	L	D	F	Y	T	D	L	K	T	I	A
Template Known Secondary structure											S	S			S																			S		S	S					S	S	S					.	T	T	S		B			S	G	G	G	B		S		B	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		469	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	S	D	S	L	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	L	R	P	P	H	V	P
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.