Job Description P75901 Confidence 2.79% Date Thu Jan 5 12:15:51 GMT 2012 Rank 31 Aligned Residues 163 % Identity 14% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																.	.	.	.	.	.	.
Predicted Secondary structure																																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	I	V	S	L	I	A	S	Y	L	K	R	T	Q	R	G	M	X	D	C	V	M	W	I	G	V	L	L	A	A	A	L	.	C	L	G	L	G	I	F	I	N	E	T	T	G	E	F	P	Q	K	E	Q	E	L	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	V	A	V	I	A
Query Conservation																																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I
Template Known Secondary structure														T		S	S	S	S															S		S											S		S	S	S	S										S	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		V	V	I	L	T	W	M	V	F	W	M	R	K	V	S	R	N	V	K	V	Q	L	E	Q	A	V	D	S	A	L	Q	R	G	N	H	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	L	V	M	M	V	F	F	A	V	A	R	E	G	L	E	S	V	F	F	L	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.
Template Conservation																																																																				.
Template Sequence		V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	.	F	V	L	I	Q	L	L	T	N	G	G	P	D
Template Known Secondary structure																						S															S							T	T	T	T	T	T																	T		.									S	S		S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.
																					139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	F	Q	Q	D	V	G	I	W	P	P	L	G	A	M	L	G	L	A	T	A	V	V	L	G	F	L	L	Y	W	G	G	I	R	L	N	L	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V	N	L	K	A	T	R	M	K	F
Template Known Secondary structure			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S																										S	S
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions