Job Description P75901 Confidence 3.77% Date Thu Jan 5 12:15:51 GMT 2012 Rank 17 Aligned Residues 105 % Identity 10% Template c3am6C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:rhodopsin-2; PDBTitle: crystal structure of the proton pumping rhodopsin ar2 from marine alga2 acetabularia acetabulum Resolution 3.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		I	V	S	L	I	A	S	Y	L	K	R	T	Q	R	G	M	X	D	C	V	M	W	I	G	V	L	L	A	A	A	L	C	L	G	L	G	I	F	I	N	E	T	T	G	E	F	P	Q	K	E	Q	E	L	F	E	G	I	V	A	V	I	A	V	V	I	L	T	W	M	V	F	W	M	R	K	V	S	.	R	N
Query Conservation																																																																															.
Alig confidence																																																																															.
Template Conservation
Template Sequence		I	F	M	I	V	F	G	I	L	G	A	F	E	D	E	H	K	F	K	W	V	Y	F	I	A	G	C	V	M	Q	A	V	L	T	Y	G	M	Y	N	A	T	W	K	D	D	K	S	P	E	Y	H	S	S	Y	V	S	L	L	V	F	L	S	I	L	W	V	F	Y	P	V	V	W	A	F	G	S	G	S	G	V
Template Known Secondary structure													T																															S																							T									T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	V	Q	L	E	Q	A	V	D	S	A	L	Q	R	G	N	H	H	G	W	A	L	V	M	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	V	D	N	E	A	I	L	M	G	I	L	D	V	L	A	K	P	L	F	G	M	G	C	L
Template Known Secondary structure		S																	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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