Job Description P75901 Confidence 1.93% Date Thu Jan 5 12:15:51 GMT 2012 Rank 57 Aligned Residues 113 % Identity 12% Template c3a7kD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.
Predicted Secondary structure																		.																																																													.	.
Query SS confidence																		.																																																													.	.
Query Sequence		I	V	S	L	I	A	S	Y	L	K	R	T	Q	R	G	M	.	X	D	C	V	M	W	I	G	V	L	L	A	A	A	L	C	L	G	L	G	I	F	I	N	E	T	T	G	E	F	P	Q	K	E	Q	E	L	F	E	G	I	V	A	V	I	A	V	V	I	L	T	W	M	V	F	W	M	R	K	V	.	.	S
Query Conservation																		.																																																													.	.
Alig confidence																		.																																																													.	.
Template Conservation
Template Sequence		I	A	M	C	V	T	G	L	A	A	A	L	T	T	S	S	H	L	M	R	W	F	W	Y	A	I	S	C	A	C	F	I	V	V	L	Y	I	L	L	V	E	W	A	Q	D	A	K	A	A	G	T	A	D	I	F	S	T	L	K	L	L	T	V	V	M	W	L	G	Y	P	I	V	W	A	L	G	V	E	G	V
Template Known Secondary structure																S																									T										T																	T									S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	V	K	V	Q	L	E	Q	A	V	D	S	A	L	Q	R	G	N	H	H	G	W	A	L	V	M	M	V	F	F	A	V	A	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	P	V	G	Y	T	S	W	A	Y	S	A	L	D	I	V	A	K	Y	I	F	A	F	L	L	L	N	Y	L	T	S	N	E	G
Template Known Secondary structure				S																	T															T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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