Job Description P16692 Confidence 100.00% Date Thu Jan 5 11:35:43 GMT 2012 Rank 3 Aligned Residues 243 % Identity 20% Template d1xtoa_ SCOP info Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase Coenzyme PQQ synthesis protein B, PqqB Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70
Predicted Secondary structure																													.	.																				.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																				.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	L	T	G	T	G	G	A	Q	G	V	P	A	W	G	C	E	C	A	A	C	A	R	A	R	R	.	.	S	P	Q	Y	R	R	Q	P	C	S	G	V	V	K	F	N	D	A	I	.	T	L	I	D	A	G	L	H	D	L	A	D	.	.	.	.	.	.	.	.	.	.	.	R	W	S	P	G	S	F	Q
Query Conservation																													.	.																				.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																				.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	V	L	G	S	A	A	G	G	G	F	P	Q	W	N	C	N	C	V	N	C	K	G	Y	R	D	G	T	L	K	A	T	A	R	T	Q	S	S	I	A	L	S	D	D	G	V	H	W	I	L	C	N	A	S	P	D	I	R	A	Q	L	Q	A	F	A	P	X	Q	P	A	R	A	L	R	D	T	G	I	N
Template Known Secondary structure								B		T	T		B	S		T	T			S								T	T		S					B		B							S	S	S	S	S					S			T	T							T		G	G	G				S	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	D	L	.	.	.	.	.	.	.	.	.	.	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P
Query Conservation																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		A	I	V	L	L	D	S	Q	I	D	H	T	T	G	L	L	S	L	.	.	R	E	G	C	P	H	Q	V	W	C	T	D	X	V	H	Q	D	L	T	T	G	F	P	L	F	N	X	L	S	H	W	N	G	G	L	Q	W	N	R	I	E	L	E	G	S	F	V	I	D	A	C	P	N	L	K	F	T	P	F	P
Template Known Secondary structure						S								G	G	G	G	G	G	.	.	G	G	G															T	T	T	T	S							T	T	S	T	T									S	S	S		B			T	T		T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		141	.	.	.	.	.																.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	H	S	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D	C	S	H	P	P	R	A	D	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.
Template Sequence		L	R	S	A	A	P	P	Y	S	P	H	R	F	D	P	H	P	G	D	N	L	G	L	X	V	E	D	T	R	T	G	G	K	L	F	Y	A	P	G	L	G	Q	V	D	E	K	L	L	A	X	X	H	.	.	G	A	D	C	L	L	V	D	G	T	L	W	E	D	D	E	X	Q	R	R	G	V	G	T	R	T
Template Known Secondary structure								T	T	S	T	T	T	T	S			T	T	S	S								T	T	T								S			S											T	.	.	T		S									S	S	T	T						T	S		S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
						196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.																																	.	.	.	.	.
Query SS confidence		.	.	.	.																																	.	.	.	.	.
Query Sequence		.	.	.	.	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	I	R	S	P	R	V	I	L	T	H	I	S	H	Q	F	.	.	.	.	.	D	A	W	L	M	E	N	A	L	P	S	G	F	E	V	G	F	D	G	M	E	I	G	V
Query Conservation		.	.	.	.																																	.	.	.	.	.
Alig confidence		.	.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		G	R	E	X	G	H	L	A	Q	N	G	P	G	G	X	L	E	V	L	D	G	F	P	R	Q	R	K	V	L	I	H	I	N	N	T	N	P	I	L	D	E	N	S	P	E	R	A	E	V	L	R	R	G	V	E	V	A	F	D	G	X	S	I	E	L
Template Known Secondary structure		S	S	S	S	S				S	S	S	S	S	S					G	G	G			S	S						S	B		T	T		G	G	G	S	T	T										T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions