|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
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. | . | . | . | . | . | |
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. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  | . | . |  |  |  |  |
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| . | . | . | . | . | . |
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|  |  |  |  |
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|  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
L | T | L | T | L | T | G | T | G | G | A | Q | G | V | P | A | W | G | C | E | C | A | A | C | A | R | A | R | R | S | P | Q | Y | R | R | Q | P | C | S | G | V | V | K | F | N | D | A | I | . |
. |
T | L | I | D | A | G | . |
. |
. |
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L | H | D | L | A | D | R | W | S | P | G | S | F | Q | Q | F | L | L |
Query Conservation |   |
|   |
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|   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   | . | . |
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|   |
| . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . |
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Template Conservation |   |
|   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
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|   |   |   |   |   |   |   |   |   |
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|   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . | . |   |
|   |   |
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|   |
Template Sequence |   |
M | Q | I | E | L | V | P | C | L | K | D | . |
. |
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N | Y | A | Y | I | L | H | D | E | D | T | G | T | V | G | V | V | D | P | S | E | A | E | P | I | I | D | S | L | K | R | S | G | R | . |
. |
. |
N | L | T | Y | I | L | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| T | T | T |
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|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . |
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|  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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| . | . | . |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | |
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. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
. | . | . | . | 50 | . | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |
| . |
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|  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
T | H | Y | H | M | D | H | V | Q | G | L | F | P | L | R | W | G | V | G | D | P | I | P | V | Y | G | P | P | D | E | Q | G | C | D | D | L | F | K | H | P | G | L | L | D | F | S | H | T | V | E | P | F | V | V | F | D | L | Q | G | L | Q | V | T | P | L | P | L | . |
N | H | S | K | L | T | F | G | Y | L | L | E |
Query Conservation |   |
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|   |
|   |
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|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   | . | . |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
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|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
T | H | H | H | Y | D | H | T | G | G | N | L | E | L | K | D | R | Y | G | . |
. |
A | K | V | I | G | S | A | . |
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. |
. |
. |
. |
. |
. |
M | D | K | D | R | I | P | G | I | D | M | A | L | K | D | G | D | K | W | M | F | A | G | H | E | V | H | V | M | D | T | P | G | H | T | K | G | H | I | S | L | Y | F | P |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  | T | T |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  | G | . | . | . | . | . | . | . | . | G | G | G | G | G | S | T | T |  |  |  |  |  |
| T | T |
|  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S | S | S | S | S |
|  |  |  |  |  | G |
Template Predicted Secondary structure |   |
|
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|
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|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |
|
Template SS confidence |   |
|
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  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . | . | |
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. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
. | . | . | 220 | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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| . |  |  |  |  |  |
|
Query SS confidence |   |
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| . |
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Query Sequence |   |
T | A | H | S | R | V | A | W | L | S | D | T | A | G | L | P | E | K | T | L | K | F | L | R | N | N | Q | P | Q | V | M | V | M | D | C | S | H | P | P | R | A | D | A | P | R | N | H | C | D | L | N | T | V | L | A | L | N | Q | V | I | R | S | P | . |
R | V | I | L | T | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|
|   |   |
|
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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| . |
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Template Conservation |   |
  |   |   | . | . |   |
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|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   | . | . |   |   |   |
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|   |
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|   |   |
|   |   |   |   |   |
|   |
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Template Sequence |   |
G | S | R | . |
. |
A | I | F | T | G | D | T | . |
. |
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. |
M | F | S | L | S | C | G | K | L | F | E | G | T | P | K | Q | . |
. |
M | L | A | S | L | Q | K | I | T | S | L | P | D | D | T | S | I | Y | C | G | H |
Template Known Secondary structure |   |
G | G | T | . | . |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T |  |  |
|
|
| S | S | S |
|  |  |  | . | . |  |  |  |  |  |  |  |  |  | T | S |
| T | T |
|  |  |  |  | S | B |
Template Predicted Secondary structure |   |
|
|
| . | . |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
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|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
123 | . | . | |
|
. | . | . | . | 130 | . | . | |
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. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |