Job Description P16692 Confidence 99.44% Date Thu Jan 5 11:35:43 GMT 2012 Rank 67 Aligned Residues 172 % Identity 14% Template c3rkjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase ndm-1; PDBTitle: crystal structure of new delhi metallo-beta-lactamase-1 from2 klebsiella pnueumoniae Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	L	H	D	L	A	D	.	.	.	.	.	.	.	.	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	D	L
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																																														.	.	.
Template Sequence		S	N	G	L	I	V	R	D	G	G	R	V	L	V	V	D	T	A	W	T	D	D	Q	T	A	Q	I	L	N	W	I	K	Q	E	I	N	L	P	V	A	L	A	V	V	T	H	A	H	Q	D	K	M	G	G	M	D	A	L	H	A	.	.	.	A	G	I	A	T	Y	A	N	A	L	S	N	Q	L	A	P	Q
Template Known Secondary structure										T	T									S	S															T										S	S	S	S					T	T							.	.	.	T	T													G	G	G
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		111	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		F	K	H	P	G	L	L	D	F	.	.	.	.	.	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P	L	N	H	S	K	L	T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.																																						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	M	V	A	A	Q	H	S	L	T	F	A	A	N	G	W	V	E	P	A	T	A	P	N	F	G	P	L	K	V	F	Y	P	G	P	G	H	T	S	D	N	I	T	V	G	I	D	G	T	D	.	.	I	A	F	G	G	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K
Template Known Secondary structure		G	T					S					B		T	T	S	B	B		T	T	T	S	T	T		T	T								S	S	S	S	S	S							T	T	T	T	.	.						T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.																			210	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	I	R	S	.	.	P	R	V	I	L	T	H	I	S	H	Q	F	D	A	W	L	M	E	N
Query Conservation																																.	.
Alig confidence																																.	.								.
Template Conservation																																									.
Template Sequence		D	S	K	A	K	S	L	G	N	L	G	D	A	D	T	E	H	Y	A	A	S	A	R	A	F	G	A	A	F	P	K	A	S	M	I	V	M	S	H	.	S	A	P	D	S	R	A	A	I	T	H
Template Known Secondary structure			T	T		S	S					T	T			T	T	T												S	T	T							S	S	.	S			B		T
Template Predicted Secondary structure																																									.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions