Job Description P16692 Confidence 99.67% Date Thu Jan 5 11:35:43 GMT 2012 Rank 37 Aligned Residues 182 % Identity 13% Template c3lvzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr6230 protein; PDBTitle: new refinement of the crystal structure of bjp-1, a subclass b32 metallo-beta-lactamase of bradyrhizobium japonicum Resolution 1.40 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	L	H	.	.	.	.	.	.	.	.	.	D	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																																																																				.	.
Template Sequence		D	G	I	A	V	Y	V	I	K	T	S	Q	G	L	I	L	M	D	T	A	M	P	Q	S	T	G	M	I	K	D	N	I	A	K	L	G	F	K	V	A	D	I	K	L	I	L	N	T	H	A	H	L	D	H	T	G	G	F	A	E	I	K	K	E	T	G	.	.	A	Q	L	V	A	G	E	R	D	K	P	L
Template Known Secondary structure		S	S	S								T	T										G	G	G											T	T			G	G	G							S			S					T	T										.	.							G	G	G
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130
		108	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																.														.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.																																.														.	.	.	.
Query Sequence		D	D	L	F	.	.	.	.	.	.	.	.	.	.	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P	L	N	.	H	S	K	L	T	F	G	Y	L	L	E	T	A	.	.	.	.	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	K	T
Query Conservation						.	.	.	.	.	.	.	.	.	.																																.														.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																.														.	.	.	.												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		L	E	G	G	Y	Y	P	G	D	E	K	N	E	D	L	A	F	P	A	V	K	V	D	R	A	V	K	E	G	D	R	V	T	L	G	D	T	T	L	T	A	H	A	T	P	G	H	S	P	G	C	T	S	W	E	M	T	V	K	D	G	K	E	D	R	E	V	L	F	F	C	S	G	T	.	.	.	.	.	.
Template Known Secondary structure					T			T	T		T	T		G	G	G								S					T	T						T	T										S	S	S	T	T											T	T													.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	I	R	S	P	R	V	I	L	T	H	I	S	H	Q	F	D	A	W	L	M	E	N	A	L	P	S	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	A	L	N	R	L	V	G	Q	P	T	Y	A	G	I	V	D	D	Y	R	A	T	F	A	K	A	K	A	M	K	I	D	V	L	L	G	P	H	.	P	E	V	Y	G	M	Q	A	K	R	A	E	M	K	D	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		T	T				S	S	S		S	S	T	T															S			S					S	S	.	G	G	G	T	T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
														205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions