Job Description P16692 Confidence 99.92% Date Thu Jan 5 11:35:43 GMT 2012 Rank 24 Aligned Residues 224 % Identity 12% Template c3h3eA_ PDB info PDB header:structural genomics, metal binding prote Chain: A: PDB Molecule:uncharacterized protein tm1679; PDBTitle: crystal structure of tm1679, a metal-dependent hydrolase of2 the beta-lactamase superfamily Resolution 2.75 Å

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		3	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure								.	.	.																																																			.	.	.	.
Query SS confidence								.	.	.																																																			.	.	.	.
Query Sequence		L	T	L	T	L	T	.	.	.	G	T	G	G	A	Q	G	V	P	A	W	G	C	E	C	A	A	C	A	R	A	R	R	S	P	Q	Y	R	R	Q	P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	L	H	.	.	.	.	D	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T
Query Conservation								.	.	.																																																			.	.	.	.
Alig confidence								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.										.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		X	R	I	H	V	L	C	D	D	S	S	Q	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	S	E	H	G	F	S	V	L	V	D	.	.	.	.	S	V	L	F	D	T	G	K	S	D	V	F	L	K	N	A	R	K	L	G	I	D	L	P	K	D	V	L	I	S
Template Known Secondary structure										S				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S						T	.	.	.	.	T							S	S	S									T	T					S					S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.																					.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.											.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.														130	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	.	.	.	.	.	.	.	.	.	.	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	D	L	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	H	Y	D	H	A	G	G	L	L	Y	L	S	G	K	R	V	W	L	R	K	E	A	L	D	Q	K	Y	S	G	E	R	Y	A	G	A	D	W	N	E	V	L	Y	Y	N	T	G	K	F	V	I	E	R	I	T	E	I	G	K	N	X	F	L	L	G	P	A	N	L	R	G	K	V	P	T	G	D	F	F
Template Known Secondary structure			S						G	G	G	G	G			S							G	G	G	G	S					T	T														S							S	S						T	T						S				T	T					S
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Q	V	T	P	L	P	L	N	H	S	K	L	T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V
Query Conservation
Alig confidence																																																							.	.
Template Conservation																																																							.	.
Template Sequence		V	E	R	N	G	E	R	R	K	D	L	F	E	D	E	Q	T	L	V	V	R	T	K	E	G	L	V	V	I	T	G	C	S	H	R	G	I	D	N	I	L	L	D	I	A	E	T	F	N	E	R	I	K	.	.	X	V	V	G	G	F	H	L	L	K	S	S	D	D	E	I	E	K	I	V	K	A	F	N	E
Template Known Secondary structure				S	S	S								T	T									T	T							S			T	T											T	T		S	S				.	.									T	T	S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	S	P	R	V	I	L	T	H	I	S	H	Q	F	D	A	W	L	M	E	N	A	L	P	S	G	F	E	V	G	F	D	G	M	E	I	G	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	V	E	T	V	V	P	C	H	C	T	G	E	R	A	V	D	I	F	K	R	E	F	L	G	K	I	X	D	C	Y	A	G	L	K	L	E	V	S
Template Known Secondary structure		T	T								T	T	S													S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions