Job Description P16692 Confidence 99.94% Date Thu Jan 5 11:35:43 GMT 2012 Rank 17 Aligned Residues 222 % Identity 19% Template c3bk2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:metal dependent hydrolase; PDBTitle: crystal structure analysis of the rnase j/ump complex Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	L	T	L	T	G	T	G	G	A	Q	G	V	P	A	W	G	C	E	C	A	A	C	A	R	A	R	R	S	P	Q	Y	R	R	Q	P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	D	L	A	D	R	W	S	P	G
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	I	I	P	L	G	G	X	G	E	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	I	T	V	F	R	F	R	D	E	I	F	V	L	D	G	G	L	A	F	P	E	E	G	X	P	G	V	D	L	L	I	P	R	V	D	Y	L	I	E	H	R	H
Template Known Secondary structure									S	B	S	B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T										B				T	T	S	T	T														T	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.																								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																	.	.	.	.																										.
Query SS confidence																											.	.	.																	.	.	.	.																										.
Query Sequence		S	F	Q	Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	.	.	.	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	.	.	.	.	D	L	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	.	L	Q	V	T	P	L
Query Conservation																											.	.	.																	.	.	.	.																										.
Alig confidence																											.	.	.																	.	.	.	.																										.
Template Conservation
Template Sequence		K	I	K	A	W	V	L	T	H	G	H	E	D	H	I	G	G	L	P	F	L	L	P	X	I	F	G	K	E	S	P	V	P	I	Y	G	A	R	L	T	L	G	L	L	R	G	K	L	E	E	F	G	L	R	P	G	A	F	N	L	K	E	I	S	P	D	D	R	I	Q	V	G	R	Y	F	T	L	D	L	F
Template Known Secondary structure		G															T	T											S				S																			T	T			S	T	T	S							T	T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																												.	.	.	.	.	.	.	.	.
Query SS confidence						.																												.	.	.	.	.	.	.	.	.
Query Sequence		P	L	N	H	.	S	K	L	T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	.	.	.	.	.	.	.	.	.	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L
Query Conservation						.																												.	.	.	.	.	.	.	.	.
Alig confidence						.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	X	T	H	S	I	P	D	N	S	G	V	V	I	R	T	P	I	G	T	I	V	H	T	G	D	F	K	L	D	P	T	P	I	D	G	K	V	S	H	L	A	K	V	A	Q	A	G	A	E	G	V	L	L	L	I	A	D	A	T	N	A	E	R	P	G	Y	T	P	S	E	X	E	I	A	K	E	L	D	R
Template Known Secondary structure						S	S	S	S									T	T								S					S	S		T	T	S																	S							T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		N	Q	V	I	R	S	P	R	V	I	L	T	H	I	S	H	Q	F	D	.	.	A	W	L	M	E	N	A	L	P	S	G	F	E	V	G	F	D	G	M
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		V	I	G	R	A	P	G	R	V	F	V	T	T	F	A	S	H	I	H	R	I	Q	S	V	I	W	A	A	E	K	Y	G	R	K	V	A	X	E	G	R
Template Known Secondary structure							S	S								T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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