Job Description P16692 Confidence 99.72% Date Thu Jan 5 11:35:43 GMT 2012 Rank 29 Aligned Residues 202 % Identity 15% Template c2r2dC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:zn-dependent hydrolases; PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	L	T	L	T	L	T	G	T	G	G	.	.	.	A	Q	G	V	P	A	W	G	C	E	C	A	A	C	A	R	A	R	.	R	S	P	Q	Y	R	R	Q	P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	N	K	L	F	V	L	D	L	G	E	I	R	V	D	E	N	F	I	I	A	N	S	T	F	V	T	P	Q	K	P	T	V	S	S	R	L	I	D	I	P	V	S	A	Y	L	I	Q	C	T	D	A	T	V	L	Y	D	T	G	C	H	P	E	C	M	G	T	N	G	R	W	P	A	Q	S	Q	L	N	A
Template Known Secondary structure																						S	T	T	S	S				S	S	S	T	T																		T	T									S		T	T		S	S	T	T		S	S								S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
															59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		P	Y	I	G	A	S	E	C	N	L	P	E	R	L	R	Q	L	G	L	S	P	D	D	I	S	T	V	V	L	S	H	L	H	N	D	H	A	G	C	V	E	Y	F	.	.	.	.	.	G	K	S	R	L	I	A	H	E	D	E	F	A	T	A	V	R	Y	F	A	T	G	D	H	S	S	P	Y	I	V	K	D
Template Known Secondary structure			B				T	T		S								T	T			G	G	G		S					S			S	T	T	T	S	T	T	G	G	G		.	.	.	.	.	S	S	S																			T			S	S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
				111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.																																.														.
Query SS confidence		.	.																																.														.
Query Sequence		.	.	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P	L	.	N	H	S	K	L	T	F	G	Y	L	L	E	T	.	A	H	S	R	V	A	W	L	S	D	T	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M
Query Conservation		.	.																																.														.
Alig confidence		.	.																																.														.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	A	W	L	A	T	P	R	N	W	D	L	V	G	R	D	E	R	E	R	E	L	A	P	G	V	N	L	L	N	F	G	T	G	H	A	S	G	M	L	G	L	A	V	R	L	E	K	Q	P	G	F	L	L	V	S	D	A	C	Y	T	A	T	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S									T	T								T	T								S	S	S	S	S	S									S	S	S								T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	I	.	.	.	R	S	P	R	V	I	L	T	H
Query Conservation																													.	.	.
Alig confidence		.																											.	.	.
Template Conservation		.
Template Sequence		.	G	P	P	A	R	R	A	G	V	L	H	D	T	I	G	Y	D	R	T	V	S	H	I	R	Q	Y	A	E	S	R	S	L	T	V	L	F	G	H
Template Known Secondary structure		.	S	S	S					S	S		S																				T						S	S
Template Predicted Secondary structure		.
Template SS confidence
			222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions